| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1305 |
|---|
| Symbol | |
|---|
| ID | 3569168 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 1417170 |
|---|
| End bp | 1417997 |
|---|
| Gene Length | 828 bp |
|---|
| Protein Length | 275 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 637679768 |
|---|
| Product | integrase catalytic subunit |
|---|
| Protein accession | YP_284526 |
|---|
| Protein GI | 71906939 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG2801] Transposase and inactivated derivatives |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 67 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 0.301759 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCGACA AGGCCCACGA TCTGCCTGTC GTCAGGCAAG TCCAGTTGCT TGAACTTTCC
CGCTCTTCTG TCTATTACCA GCCGCAGCCC ATCCCCGAAG ACGATCTTCG GTTGATGCGT
CGAATCGATG AACTGCATCT GGAATACCCC TTTGCCGGGG CGCGGATGCT GCGTGACATG
CTCAAGTTGG AAGGCCATGG AATCGGCCGC AAGCATGTCG GTACGCTGAT GAAGAAGCTC
GATATTCAGG CCATCTACCG CAAGGCCAAC ACCAGCCGGC GCAACCAGGC GCACCGCATC
TATCCCTACC TGCTGCGCGA CCTCGCCATC GACCGTCCGA ATCAGGTCTG GGCCATGGAT
ACGACCTACA TCCCAATGCG CCGGGGCTTC GTCTATTTGA GCGCGGTGCT TGATTGGGCC
ACTCGCCGGG TGCTGGCTTG GCGCCTATCG AACAGTTTGA CCTCCGATCC TTGTGTGGAT
GCCCTGGAAG AAGCCATCAT GAAGTACGGC CGACCAGAAA TCATGAACAC CGACCAAGGC
AGCCAATTCA CCAGCTCCGC CTTCATTGGC TTGCTTCAGG AGAGCACCAT TCAGGTCAGC
ATGGATGGCA AGGGCTGCTG GCGGGACAAC GTCTTCGTTG AGCGCCTCTG GAAATCGGTC
AAGTATGAGG AGATTTACCT GCACGGCTAC GACACCGTTT CCGAGGTCCG GCAGGCGCTG
GCCCGCTATT TCGATTTCTA CAATCGCCGT CGCCCGCACT CAACGCTTGA CGGGCAAACC
CCGGATACGG CTTACTTCAA CCAGCCGCTG CTCGCCGCAG CGGCTTAA
|
|---|
| Protein sequence | MIDKAHDLPV VRQVQLLELS RSSVYYQPQP IPEDDLRLMR RIDELHLEYP FAGARMLRDM
LKLEGHGIGR KHVGTLMKKL DIQAIYRKAN TSRRNQAHRI YPYLLRDLAI DRPNQVWAMD
TTYIPMRRGF VYLSAVLDWA TRRVLAWRLS NSLTSDPCVD ALEEAIMKYG RPEIMNTDQG
SQFTSSAFIG LLQESTIQVS MDGKGCWRDN VFVERLWKSV KYEEIYLHGY DTVSEVRQAL
ARYFDFYNRR RPHSTLDGQT PDTAYFNQPL LAAAA
|
|---|
| |