| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1230 |
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| Symbol | |
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| ID | 3569414 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1334876 |
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| End bp | 1337515 |
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| Gene Length | 2640 bp |
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| Protein Length | 879 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637679697 |
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| Product | DNA gyrase subunit A |
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| Protein accession | YP_284456 |
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| Protein GI | 71906869 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit |
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| TIGRFAM ID | [TIGR01063] DNA gyrase, A subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.0017603 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.486018 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACCAAT TCGCCAAAGA AACTCTGCCG ATCAGCCTCG AAGACGAGAT GCGGCGTTCC
TATCTCGATT ACGCGATGAG CGTGATTGTT GGCCGGGCGC TGCCGGATGC GCGCGACGGC
CTGAAGCCGG TGCATCGCCG CGTCCTGTTT GCGATGCACG AGCTGAACAA CGACTGGAAC
AAGGCGTACA AGAAATCGGC GCGTATCGTC GGTGACGTGA TCGGTAAGTA TCACCCGCAC
GGTGATACCG CGGTCTATGA CACGATCGTC CGTATGGCGC AGGATTTCTC GCTGCGCTAC
ATGCTGGTTG ATGGCCAGGG TAACTTCGGT TCGGTCGACG GCGATAGCGC GGCGGCAATG
CGTTACACCG AAGTCCGCAT GGCTAAGATC GGCCACCAGA TGCTGGAAGA TCTGGATAAG
GAAACGGTCG ATTTCGGGCC GAACTACGAT GGTTCCGAAA ACGAGCCGCT GGTCATGCCG
GCGCGTATCC CCAACCTGCT GATCAACGGC TCGTCCGGTA TCGCGGTGGG CATGGCGACC
AATATCCCGC CGCACAATCT CAATGAAGTC ATCGCCGGCT GCCTGGCGCT GCTGGAAAAT
CCGGCACTGA GCATCGAAGA CCTGATTGCC TATATCCCCG CCCCGGACTT CCCGACCGCA
GGCTTGATTT ATGGCATGAC GGGGGTCCGC GAGGGTTACC AGACCGGTCG TGGCCGCGTC
ATCATGCGTG CTCGGACTCA CTTCGAGGAC ATGGAAAAGA GCAACGGTCG CCAAGCGCTG
ATCGTTGACG AGATTCCCTA TCAGGTTAAC AAGAAGTCAC TGATCGAGAA GATCGCCGAA
CTGGTCAACG AGAAGAAGAT CGAAGGCATT TCCGATATCC GCGACGAGTC CGACAAGTCG
GGCATGCGCA TCGTCATCGA ACTGAAGCGC GGCGAAGTCG GCGAGGTCAT CCTCAATAAC
CTGTACAAGC AAACGCAGCT GCAGGATACC TTCGGCATGA ACATGGTCGC GCTGGTCGAT
GGCCAGCCGC GCCTGCTCAA CCTGAAGCAG ATGCTGGAAT GCTTCCTGTC GCATCGTCGC
GAAGTCATTA CCCGGCGCAC CGTCTACGAA CTGCGCAAGG CGCGCGAACG CGGTCATATC
CTCGAAGGTC TGGCTGTTGC GCTGTCCAAT GTTGACGAAA TCATCACCCT GATCAAGGCG
GCGCCGACGC CGGCCGATGC CAAGCGCGGC TTGATGGAGC GTACCTGGCG CAGCGCGGTG
GTTGAGGAAA TGCTGGTCCG TGCCGCTTCC GATGCCTCGC GTCCGGAAGG GCTGGCGCCG
GAATTCGGTT TGTCGGCACA GGGTTATCGC CTGTCCGATG CTCAGGCGCA AGCGATTCTC
GAACTGCGAC TGCAGCGCCT GACCGGGTTG GAGCAGGACA AGATCGTCGG CGAGTACAAG
GATGTCATGG CCAAGATCCT CGATCTGCTC GACATCCTGG CCAAGCCGGA ACGCATTACT
GAAATCATCG TGACCGAGCT GGTGGCGATT CGCGAACAGT TTGGCGACGA GCGGCGCTCG
GAAATCATCC TGCAGACGCA CGAACTGAGT CTGGAAGACC TGATCACGCC TCAGGATATG
GTGGTTACGC TGTCGCACGG CGGCTACATC AAGGCCCAGC CGCTGGCCGA CTACCGCGCC
CAGCGGCGTG GTGGTCGTGG CAAGCAGGCA GCGGCGATCA AGGACGAGGA TTTCGTCGAT
CACCTGTTCA TGGCCAATAC CCACGATTTC ATCCTGTGCT TCTCGAACCG CGGCCGTTGC
TACTGGCTGA AGGTTTACGA AGCGCCGCAG GGCAGCCGCG TCAGCCGCGG CAAGCCGATC
GTCAATCTCT TCCCGTTGGA AGAGGGCGAG CGGATCAACG CCGTGCTGCC GGTCAAGGAA
TTCGCCGACG ACAAGTTCAT CTTCATGGCA ACCCGTGCCG GTACCGTCAA GAAGACCCCG
TTGTCCGACT TCTCCAATCC GCGCAAGGCC GGCATCATCG CGGTCGACTT GCTTGATGAC
GATTATCTGA TCGGCGTCGA ACTGACCACC GGCCAGAGCG ACATTGTGCT GGTTTCCAAC
GCCGGCAAGG CCGTTTGGTT CGACGAGGAA GATGTCCGTC CGATGGGTCG TGGTGCCCGT
GGCGTCCGAG GCATGAAGCT GCAGGCCGGT CAGGCGGTGA TTTCCCTGCT GGTTGCCGAG
AGCGATCAGC AGACCGTGCT GGTCGCTACC GAAAACGGCT TCGGCAAGCG CACGGTATTG
GCTGACTTCC GCCATTCCGG TCGCGGCACG CAGGGTGTCA AGGCGATCGC CGACAGCGAG
CGCAACGGCG TGGTGATTGG TGCCAAGCTG GTCGACGACA ACGACGAAGT GATGTTGATC
ACCACCGGCG GTGTGCTGAT CCGCACCCGC GTCTCGGAAA TTCGTGGCAT GGGCCGGGCA
ACTCAGGGCG TGACGCTGAT CTCGCTGGAT GATGGAGAGA AGCTGGCTGG TCTGGAAAAG
GTCGCTGAGT CGGTGGCAGA AGCCGAGGTA GAAGGTGAGT CCGAAGTTGT CGCTCCGGAA
ACGGGCGATG CTGCACCGAG CGAAGGTGAT GTTGCCAGCA ACGAAGGTGG AGAAGTCTGA
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| Protein sequence | MDQFAKETLP ISLEDEMRRS YLDYAMSVIV GRALPDARDG LKPVHRRVLF AMHELNNDWN
KAYKKSARIV GDVIGKYHPH GDTAVYDTIV RMAQDFSLRY MLVDGQGNFG SVDGDSAAAM
RYTEVRMAKI GHQMLEDLDK ETVDFGPNYD GSENEPLVMP ARIPNLLING SSGIAVGMAT
NIPPHNLNEV IAGCLALLEN PALSIEDLIA YIPAPDFPTA GLIYGMTGVR EGYQTGRGRV
IMRARTHFED MEKSNGRQAL IVDEIPYQVN KKSLIEKIAE LVNEKKIEGI SDIRDESDKS
GMRIVIELKR GEVGEVILNN LYKQTQLQDT FGMNMVALVD GQPRLLNLKQ MLECFLSHRR
EVITRRTVYE LRKARERGHI LEGLAVALSN VDEIITLIKA APTPADAKRG LMERTWRSAV
VEEMLVRAAS DASRPEGLAP EFGLSAQGYR LSDAQAQAIL ELRLQRLTGL EQDKIVGEYK
DVMAKILDLL DILAKPERIT EIIVTELVAI REQFGDERRS EIILQTHELS LEDLITPQDM
VVTLSHGGYI KAQPLADYRA QRRGGRGKQA AAIKDEDFVD HLFMANTHDF ILCFSNRGRC
YWLKVYEAPQ GSRVSRGKPI VNLFPLEEGE RINAVLPVKE FADDKFIFMA TRAGTVKKTP
LSDFSNPRKA GIIAVDLLDD DYLIGVELTT GQSDIVLVSN AGKAVWFDEE DVRPMGRGAR
GVRGMKLQAG QAVISLLVAE SDQQTVLVAT ENGFGKRTVL ADFRHSGRGT QGVKAIADSE
RNGVVIGAKL VDDNDEVMLI TTGGVLIRTR VSEIRGMGRA TQGVTLISLD DGEKLAGLEK
VAESVAEAEV EGESEVVAPE TGDAAPSEGD VASNEGGEV
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