| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_1226 |
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| Symbol | |
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| ID | 3569410 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1331293 |
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| End bp | 1331961 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637679693 |
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| Product | phosphoglycolate phosphatase |
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| Protein accession | YP_284452 |
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| Protein GI | 71906865 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0546] Predicted phosphatases |
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| TIGRFAM ID | [TIGR01449] 2-phosphoglycolate phosphatase, prokaryotic
[TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01549] haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 0.000000334097 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.244171 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTGATG CTGTTCTGTT CGACCTGGAT GGCACCTTGG CCGACACGGC GCCCGACCTG
GGCGAGTCGG TCAACATTCT GCTGCTGGAG GAAGGACGAC TGCAGATCCC GCTTGAAACC
CTGCGCCCCT TCACGTCGCA GGGCGTTCGT GGCCTGCTAA AGACTGGCTT TGGCATCGAC
GTTGCGCATT CCGCCTACGA ACGCCTGTCG CAACGCTTTC TCGCCATTTA CGCAGAGCGC
TTGTGCCATG CCACCCGGCT GTTCGATGAA ATTCCGGAAT TGCTGGATGC GCTGGAGCAG
ATGAGTCTGG CCTGGGGGAT CGTCACCAAC AAACGGATGC GCTTTACCGA CCCTTTAGTC
GAATTGCTGC AACTCACCCC TCGTACCACC TGCGTCGTCA GCGGCGACAC GACGGCCGAA
GTCAAGCCGT CGCCATTGCC CATCCTGCAT GCCTGCCGCC TGCTGAACTG CCGGCCGGAG
CGCACACTCT ACGTTGGCGA TGACCGGCGT GACATCGTCG CCGGCAACGC AGCCGGTTGC
AAGACAGTGG CTGTTTCCTA TGGCTACCTC GGCGATAGCG GTCCTCCACA CACTTGGGGC
GCCGATCTGA TCATCGACCG GCCAAGCGAA CTGGCGGAAT ACCTCGCTAG ACACGCCGGG
CCGAAATAA
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| Protein sequence | MFDAVLFDLD GTLADTAPDL GESVNILLLE EGRLQIPLET LRPFTSQGVR GLLKTGFGID
VAHSAYERLS QRFLAIYAER LCHATRLFDE IPELLDALEQ MSLAWGIVTN KRMRFTDPLV
ELLQLTPRTT CVVSGDTTAE VKPSPLPILH ACRLLNCRPE RTLYVGDDRR DIVAGNAAGC
KTVAVSYGYL GDSGPPHTWG ADLIIDRPSE LAEYLARHAG PK
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