Gene Daro_1169 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1169 
Symbol 
ID3569295 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1273952 
End bp1275211 
Gene Length1260 bp 
Protein Length419 aa 
Translation table11 
GC content63% 
IMG OID637679636 
Productaromatic-ring hydroxylase 
Protein accessionYP_284395 
Protein GI71906808 
COG category[C] Energy production and conversion 
COG ID[COG1252] NADH dehydrogenase, FAD-containing subunit 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones41 
Plasmid unclonability p-value0.0890249 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGACCA CCCGTCGCCA GTTTCTGTTT GCTGCCGGGC TGATGCCGCT GGTCGGCAGC 
ACTCGGGCAG CGAATCGCCG CGTCGTCGTG GTCGGTGGCG GCTGGGGCGG ATTGTCGGCC
GCCCGCCACC TGCGCGCCCT GGCGCCCGAT CTCGAAGTCG TGCTGATCGA CCGCCAGCCG
GCCTTCGTTT CTTTCGCCCT GAGCAATCGC TGGCTGGTCG ACGCGGCGGC ACAGGGGCCG
GAACGTCATG ACTACGCGAC GCTTGCCGCA CGTTGGGGTT ACCGCTTCCT ACAGGCGGAG
GTGAGCAGCA TCGATCGCTC GGCGGGCATC GTGATCGCCG GCAATGAGCG GCTGTCCTAT
GACTGGCTGG TTATTGCGCC GGGTATCCGG GAGAACTATG CGGCCTGGCA GCTTGAGGAT
CCGGCAATGA TCGCCGAACT GTGCTATCGC CATGGCGGCG CCATGGTGAA CGGTGCCGAT
CTGCCGGCCT TGAAGCAGCG GCTGGCCAGC TTCAAGGGCG GTGACCTGCT GATGAGCATT
CCCCCGGCCC CTTATCGCTG CCCGCCGGCG CCTTACGAGC GGGCGATGCT GCTTGCCTGG
TGGCTGAAGA CCCGGAAAAT TCCAGGCAAA TTGATCATCG TCGATCCGAA TCCGATCATG
CCGGCCTTCC GATCGATTTT GCTCGATCGC TTCAAGGATC AGGTTACCTA TTTCGACCAC
GCGAAGATTC ACCAAATCGA TCCGGCGCGC CAGACGGTGA GTACCGAAAT TGACGATATC
CATTTCGATG CAGCCCTGCT TTGCCCTCCG CAGCAGGCGG CCGACCTGAT CTGGCAGGCC
GGGCTGATCC GCAACGAAGA AGGCGGGCGG CCGAGTGGCT GGGCCGCACA GGGCGCGATT
GATTTCCGCA GCCCGGCTGA CGAACGGGTG TTCATCATTG GCGACTCGAG CGGCATGGTG
TCGCCGGCCT TCGGGCTCTA TCCCAAAACC GGGCACGTCG CCAACCGAAT GGGGCTGGCC
GTGGCCCAAC AGATCGCCAC GCAGGCCACC GGTCGCGAAT TTCCTCCCTT GTTGCCGGAG
AGCGTTTGCC ACGTTCTGAG CAATGTCGAG CCAGACGAAC AAACACTGAT CGAGACCAGC
TACCGCCAGC GCGGCGATGG CTTCCTGCTG CAACAGGTCA AGCAGACGCG CAACCCCAAT
CCGGGCGGTG AAGATGTCGT CTGGGCCGAG GCGATGTATC GGGATTTCCT GAGGCCATGA
 
Protein sequence
MKTTRRQFLF AAGLMPLVGS TRAANRRVVV VGGGWGGLSA ARHLRALAPD LEVVLIDRQP 
AFVSFALSNR WLVDAAAQGP ERHDYATLAA RWGYRFLQAE VSSIDRSAGI VIAGNERLSY
DWLVIAPGIR ENYAAWQLED PAMIAELCYR HGGAMVNGAD LPALKQRLAS FKGGDLLMSI
PPAPYRCPPA PYERAMLLAW WLKTRKIPGK LIIVDPNPIM PAFRSILLDR FKDQVTYFDH
AKIHQIDPAR QTVSTEIDDI HFDAALLCPP QQAADLIWQA GLIRNEEGGR PSGWAAQGAI
DFRSPADERV FIIGDSSGMV SPAFGLYPKT GHVANRMGLA VAQQIATQAT GREFPPLLPE
SVCHVLSNVE PDEQTLIETS YRQRGDGFLL QQVKQTRNPN PGGEDVVWAE AMYRDFLRP