Gene Daro_1162 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1162 
Symbol 
ID3570122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1267027 
End bp1267569 
Gene Length543 bp 
Protein Length180 aa 
Translation table11 
GC content60% 
IMG OID637679629 
Productelectron transport complex protein RnfB 
Protein accessionYP_284388 
Protein GI71906801 
COG category[C] Energy production and conversion 
COG ID[COG2878] Predicted NADH:ubiquinone oxidoreductase, subunit RnfB 
TIGRFAM ID[TIGR01944] electron transport complex, RnfABCDGE type, B subunit 


Plasmid Coverage information

Num covering plasmid clones66 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCAGCG CCCTAGCCAT CATGGCCCTC GGGGCCATCA TTCTCGGTGC CGCCCTTGGC 
TTTGCCTCGA TCAAATTCAA GGTCCATGGC AATCCGCTGG TCGAAAAAAT CGAAGGCCTG
CTGCCTCAGA CCCAGTGCGG TCAATGCGGA TTCCCCGGCT GCCATCCCTA CGCCGAAGCC
ATCGCCAAGG GCGAGGCCGA CATCAATCTT TGCCCTCCCG GTGGCGAAGA AGGTGTCCGC
AAGCTGGCTG ATCTGCTCGG GCGTGAAGTC AAGGCGCTGA ACGCCGAAGA AAAACCAAAA
CAAGTGGCGG TCATCGACGA AAACACCTGC ATCGGCTGCA CGCTGTGCAT CCAGGCCTGC
CCCGTCGATG CCATCGTCGG CGCGGCCAAG CAGCTGCACA TCATCATCGC CCAGCAATGT
ACCGGCTGTG AACTCTGCCT GCCGCCCTGC CCGGTCGAAT GCATTGCCAT GGCCACCATC
CCGGAAACCG TGGATAACTG GAAATGGAAA TACCCGGTTA CCGAGATCAG GAAAGCTGCC
TGA
 
Protein sequence
MISALAIMAL GAIILGAALG FASIKFKVHG NPLVEKIEGL LPQTQCGQCG FPGCHPYAEA 
IAKGEADINL CPPGGEEGVR KLADLLGREV KALNAEEKPK QVAVIDENTC IGCTLCIQAC
PVDAIVGAAK QLHIIIAQQC TGCELCLPPC PVECIAMATI PETVDNWKWK YPVTEIRKAA