Gene Daro_1100 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_1100 
Symbol 
ID3569373 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1203131 
End bp1203715 
Gene Length585 bp 
Protein Length194 aa 
Translation table11 
GC content62% 
IMG OID637679562 
ProductTetR family transcriptional regulator 
Protein accessionYP_284326 
Protein GI71906739 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones48 
Plasmid unclonability p-value0.0669836 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.61487 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAATC GTCACGACAA TACCCGCCAG CACATTCTCG AAACCGGCCA CCGCATCATC 
GCGGGCAAGG GCTTCGCGAG CGTCGGGCTG AACGAAATCC TCACTTCGGC CGGCGTGCCC
AAGGGTTCGT TCTACCACTA CTTCGAATCC AAGGAACAAT ACGGCCAGGC TTTGCTGCAG
GAGTATTTCG ACCATTACCT GGCCGATCTC GACGAACTGT TCGCCGCCGA TGCCGCCTCC
GGGCACGAGC GCCTGATACG CTACTGGCAG CGCTGGCTGG GCAAGCAACT CGAGGCCTGT
GCCGAGCAGA AATGTCTGGT CGTCAAGCTG GCCGGCGAAG TGTCCGACCT CTCCGATGCC
ATGCGCATCA CCCTGCGCGA CGGCACGGAC CAGATCGTCA AGCGCATCGC CCGCATCATC
GAAGCCGGTG TTGCCGATGG CTCGGTGCCG CCGCTCGACC CGCAGATGAC CGCCCAGACC
CTGTACCAGA TGTGGCTGGG CGCCAGCCTG CTTGGCAAGT TGCACCGCGA CACCGCGGCG
CTGGAAAACG CCATGGTCTT CACCCGAAAA CTGCTGTCCC GCTAA
 
Protein sequence
MNNRHDNTRQ HILETGHRII AGKGFASVGL NEILTSAGVP KGSFYHYFES KEQYGQALLQ 
EYFDHYLADL DELFAADAAS GHERLIRYWQ RWLGKQLEAC AEQKCLVVKL AGEVSDLSDA
MRITLRDGTD QIVKRIARII EAGVADGSVP PLDPQMTAQT LYQMWLGASL LGKLHRDTAA
LENAMVFTRK LLSR