Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_1015 |
Symbol | |
ID | 3568440 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1109150 |
End bp | 1110721 |
Gene Length | 1572 bp |
Protein Length | 523 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637679474 |
Product | major facilitator transporter |
Protein accession | YP_284241 |
Protein GI | 71906654 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
Num covering plasmid clones | 65 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCGCACC TGCAAGGCCG GTTCAGTCGC CACCGCTCGC TCATGCCACA GCGCTCAGGC AAAATAACCA AAAAGGCACT TGCCTCATCC GAGGCACCGT ATACTTTTTT ACCAGCCAAC GAGCAGCCGA CAATTCCGAT GCGACGCCTC CGCCCAGCAA CAAGCTTTGA CACGCTTTCC CAACGTTATG GGGAACGCTA CAAATGGATG GTGCTGTTCA TTCTCGCGCT GGGTACCGTG GCCGGGGTTC TTTGCACCTC CAGCTTCAAT GTGGCCGTCC CGGCCCTCTC CCGGCACTTC CGGCTTGGGC AGGACCAAGT GCAATGGGCC ATGACCGGAT TTCTGGCGGC GATGACCGTC GGTATGCTGC CGACCTCGTG GTTACTCGAC CGCTTGGGCT TTCGCATTAT TTTCCTGCTT TCCCTGGCCG TCCTGACACT GGCCAGCGTG GGTGGTTACT TTGCTCCCAG CTTTACGCTC GTCGTCGCGG CCCGCATTCT GCAGGGCCTG GCTGCCGGGG TGCTGCAACC GATGGGCGCA TTGGCGCTGA TGCGCCTCTT TCCGCCGGAG ATTCAGGGAA GAGCTTCCGG AATACTGATC TTCAGTATCG CCCTGACCCC GGCCATCGCG CCCTCGTTGG GCGGCGCCTT GCTGGATCGC TTTGGCTGGG AGTCCATTTT TCTGCTGGGC ACGCCATTCG CCGTCATTGC GGCGCTGTGC GCCATTTATC TGTTACCGGC ACCACGGGAG ATCAAACGCA AGCCGTTCGA CTGGCTGGGG CTGGGCTGGC TCACGCTGGG CGCCATCGCC CTGATCGAAA GCGTATCGAG TCTTCAACAC AGCGGCCTGG CCTCGCCGTG GACAATGGGC CAGTTTGCCC TGGCTTTCGT CGCGTCGGCG CTGTATTACC GGCACGCCAG GCTGCGCAGC GACCCGCTGA TCAACCTGGA TTTGTTTCGG CAACGCACCT TCGCCATGGG AACGCTGGTC TCCTTTGCCT ATGGCTTTGG CCTGTACGCA TCGACCTACC TGATTCCTGT CTTTCTCCAG AATGCCTTGT CGTTCAAGGC GGGTGCCGCC GGCATGGCCT TGCTGCCTTC CGGGATCGCA CTCGTCGTGA TGCTGCCATT GGCCGGGCGC ATGGCGGACC ATTACTCGCC CAAATGGATC ACCTTGATCG GACTCGTCGC CTTCGGTGCC TCCTTCCTCA TTTTTTCCAT ACGGGGCGGC GCCATTCAGT ACGCCGAAAT CATCGCGGCC ACCATCATCG GCCGCATCGG ACTCGGCATG ATTCTGCCGG CACTCAACCT CGCGACGCTG CGTCACATGG AACCCCACCA ACTGGGTCAA TCCTCGGTCG TGACCAGCTA TGCCCGGCAA TTGGGCGGTG TCATGGGAGT GGCGGTGCTG GCGGTCTTTG TCGAATGGCG CGAAACCGTT TACGGCACAG TACCGCCGGG GATTTACTCG GCGTATTCCC AGGGCTTCCT GCTCCTCACC GCCGTTTTTT CGCTTGCCGT GCTGGCAGCT TGTTTCATGA GGACAGAAGG TAGCCGTCCT TCCCCAAAAT AA
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Protein sequence | MAHLQGRFSR HRSLMPQRSG KITKKALASS EAPYTFLPAN EQPTIPMRRL RPATSFDTLS QRYGERYKWM VLFILALGTV AGVLCTSSFN VAVPALSRHF RLGQDQVQWA MTGFLAAMTV GMLPTSWLLD RLGFRIIFLL SLAVLTLASV GGYFAPSFTL VVAARILQGL AAGVLQPMGA LALMRLFPPE IQGRASGILI FSIALTPAIA PSLGGALLDR FGWESIFLLG TPFAVIAALC AIYLLPAPRE IKRKPFDWLG LGWLTLGAIA LIESVSSLQH SGLASPWTMG QFALAFVASA LYYRHARLRS DPLINLDLFR QRTFAMGTLV SFAYGFGLYA STYLIPVFLQ NALSFKAGAA GMALLPSGIA LVVMLPLAGR MADHYSPKWI TLIGLVAFGA SFLIFSIRGG AIQYAEIIAA TIIGRIGLGM ILPALNLATL RHMEPHQLGQ SSVVTSYARQ LGGVMGVAVL AVFVEWRETV YGTVPPGIYS AYSQGFLLLT AVFSLAVLAA CFMRTEGSRP SPK
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