Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0966 |
Symbol | |
ID | 3570281 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | - |
Start bp | 1049883 |
End bp | 1052123 |
Gene Length | 2241 bp |
Protein Length | 746 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 637679425 |
Product | type II secretion system protein E |
Protein accession | YP_284192 |
Protein GI | 71906605 |
COG category | [N] Cell motility [T] Signal transduction mechanisms [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.783688 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTGACT ATTCGGCACT CTTCACCGGC CAGACCAGCA CGCCGCAAGC GCCGGCCAGT CACCTGACGC CGCCGAAATA CCGCCTGCTG ATCGTCGATG ACGAAGTCGG CATCGTCAAG GCGCTGACGC GCGTATTCCG TCAGGAAAAC TATGAAGTCG TGACTGCCGG CAGCGGCAAC GAAGGTCTGC AGCGCATGGC AGAGGGCAAT TTCCAGCTGA TCATCAGCGA CTTCATGATG CCTGGCATGA ACGGCGCCCA GTTCCTGCGC GAGGTCAAGC AACGTTCACC GGAAACGATC CGCATCATGC TGACCGGCCA TGCCAATACC GATGCCGTGA TGGGCGCCAT CAACGAAGGT GCGGTATACA AATTCATCCT CAAGCCGTGG AACGATGACG ATCTGCGTGT CACCGTCGCA CTGGCTTTGG AGCAGTTCGA CCTGATCACC CGCAACCGGG TTCTGAAGAC CGAAAACGAG AAGAAATCCA AGGAAATCTC GGCGCTGAAT CGCCTGGCGG TGACCCACCG CAGTCGACTG GGCATCATGC TGCACAAGAA AAACCTGCTC AACGCGGCCC AGTTGCAGGA ACTGACCTTG CTGCAGGAGC GACGCAAGGA GCCGCTGATC GCCCTGCTCC TCGAAAAGGA CTGGATCAGC GAGCGGCAGA TTCGCACCCT GCTCAAGTCG GAAATGCTGA TCGACGAGGT CCAGCTACCA GAATTCCGCA TCGATGCAGT GCTGGCCGAG CTGATCCCGC ACAGTTTCTG CCAGCGCCAA CTGGTCGTCC CGCTCAAGCT GGAAGGCCGG CGCCTGCTGC TGGCGATGGC AGACCCGCTC GACGAGGGCC TGATCGACGA AGTTCGTTTC ACGGCCGGTC TCGACCTGAA AATTGTCACG GCCGACACCG AGGCAATCCG CAACAAAATC AATGAGCTGT ACGGCGAAGG CGGCGTCGAT TTCAAGGAAC TGGAGACCCT GGTCAGCAGC CCGGACCCTT ACGAGGGGAT CGAGATCGTC ATCGAGGAGG AGGACACCGC CCAGCTCGAA GACCTGCTCC GCGAAACCGA GGCCCCGCCA GCCATCCGTC TGGCCAACGC AATCATTCTC GAAGCCATCC GGCTCGGCGC TTCCGACATC CACATCCAAC CCCGGATCAA GTCCGTTGTC GTCCGCTACC GGATCGACGG CGTGCTGACC GACAAGATTC AGATCCCGCA CCACCTGCAC CAGTCGCTGG TGTCGCGCCT GAAGATCATG TCCGAACTGG ACATTTCCGA ACGCCGGCGA CCACAGGATG GCCGGATCAC CGTCAAGACG CCGATGCGCA TGGTGGATCT GCGCATTTCC ACCCTGCCGA CGATCAACGG CGAGAAGGTG GTCATGCGCA TTCTCGACCG CAATTCAACG GTGCATACGC TGGACCGCCT TGGCTTCTCG CCCGTCGACC TGCCGCGCGT CGCCGACATG GTGGCCCGGC CGCAGGGCAT CATCCTGGCG ACCGGCCCGA CCGGCAGCGG CAAGACAACC ACCTTGTATT CGCTGCTCCA ACACGATGCA ACACCTGACA AGAACTACGT CACCATCGAA GATCCGGTCG AGTACTACCT CGACATGGCC GGGCAGGTCC TGGTCAAGGA AAAGATCGGT CTGACTTTCC CATCCATTTT GCGTGCCTTG TTGCGCCAGG ATCCGGATGT TGTGCTGCTC GGCGAAATCC GTGACTTCGA AACCGCCGAG GTGGCTTTTC ATGCCGCCCT GACCGGCCAC CTCGTTTATT CGACCCTGCA CACCAATTCG GCGATCGCGA CGATTGCTCG CCTGTTCGAC CTTGGCCTCA AACCCTATAT TGTCGCCACG GCGCTGGAAG GCATCATCGC TCAGCGACTG GTCCGCCAGA TCTGCCCGCA TTGCCGTACC GAGGTCGATG CCGAGCCGGC ACTGCGGGCA AGACTGGGCG GTCACTTTGC CCTGCTTGAA CGAAGCTATC GCGGCGCCGG CTGCAACCAC TGTCATGGCT CGGGTTACAA AGGGCGGGTC GGTCTGTATG AAGTACTGGC GCTTGATGAC GAATTACGCG ACCGGATCGG CAGCGGTGCC AGCGTGCTGG AAATTCGTCG CCTGGTCCGC CAGAAAGGCT TGCGGGGCAT TGGTTGCCAC GCCTTGGAGC GCGTTCAGTC CGGCGCTACC AGCCTGGAGG AAATTCTGCG TGTTCTCGGC CCACAGGCCG GAGAGGACTA A
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Protein sequence | MTDYSALFTG QTSTPQAPAS HLTPPKYRLL IVDDEVGIVK ALTRVFRQEN YEVVTAGSGN EGLQRMAEGN FQLIISDFMM PGMNGAQFLR EVKQRSPETI RIMLTGHANT DAVMGAINEG AVYKFILKPW NDDDLRVTVA LALEQFDLIT RNRVLKTENE KKSKEISALN RLAVTHRSRL GIMLHKKNLL NAAQLQELTL LQERRKEPLI ALLLEKDWIS ERQIRTLLKS EMLIDEVQLP EFRIDAVLAE LIPHSFCQRQ LVVPLKLEGR RLLLAMADPL DEGLIDEVRF TAGLDLKIVT ADTEAIRNKI NELYGEGGVD FKELETLVSS PDPYEGIEIV IEEEDTAQLE DLLRETEAPP AIRLANAIIL EAIRLGASDI HIQPRIKSVV VRYRIDGVLT DKIQIPHHLH QSLVSRLKIM SELDISERRR PQDGRITVKT PMRMVDLRIS TLPTINGEKV VMRILDRNST VHTLDRLGFS PVDLPRVADM VARPQGIILA TGPTGSGKTT TLYSLLQHDA TPDKNYVTIE DPVEYYLDMA GQVLVKEKIG LTFPSILRAL LRQDPDVVLL GEIRDFETAE VAFHAALTGH LVYSTLHTNS AIATIARLFD LGLKPYIVAT ALEGIIAQRL VRQICPHCRT EVDAEPALRA RLGGHFALLE RSYRGAGCNH CHGSGYKGRV GLYEVLALDD ELRDRIGSGA SVLEIRRLVR QKGLRGIGCH ALERVQSGAT SLEEILRVLG PQAGED
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