| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0965 |
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| Symbol | |
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| ID | 3570280 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 1047835 |
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| End bp | 1049880 |
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| Gene Length | 2046 bp |
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| Protein Length | 681 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 637679424 |
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| Product | PAS:hemerythrin HHE cation binding region |
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| Protein accession | YP_284191 |
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| Protein GI | 71906604 |
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| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG2703] Hemerythrin
[COG4191] Signal transduction histidine kinase regulating C4-dicarboxylate transport system |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR02481] hemerythrin-like metal-binding domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 41 |
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| Plasmid unclonability p-value | 0.94683 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 0.555707 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGACGCAT TTGTCTGGAA CGAGCGCTAC ATGACAGGAG AAGCGCAGGT TGATGAGGAG
CATCAGGAAC TGGTGCGTAT CATCAACTGG GTCATCGAAC ACCAATCCGT GCCGGCGCAG
GATGACGATA TCCAGCGGGT ATTGGCCAGC TTGGCCAACT ATGCCGTGAT GCACTTCGGA
CACGAGGAGG AGCTGATGGA GCAGATGCAT TGTGACCCCC GCTTCATTCA GGCGCACGTC
GCGGTGCATC AGGAATTTGC CCGCCAAGTC GGAAAAATGC TGGAGTTCCA GGGCGGCAAA
GCCGATGTTG AATATCTGCT GCGTTTCCTC AGTAGCTGGC TGGCTCATCA CATCCTCGGT
ATTGATCAGT CGATGGCCCG CCAGATCGCA AAGATCCGTG CCGGGGCCGC GCCGGAAGCG
GCTTTCGAGG CCGAGAAAAG AATCCCTCAT GACCCGTCGA CCGCCAGCCT GCTCGATGCG
ATGAACGCCT TGTTCCGCAT GGTCGCCAGT CGCAACGAGG CATTGGAGAA GCTCAATGCC
AGCCTGGGGG CGCAAGTCGC AGCACAAACA GCTGATCTGA TGCAATCCAA TCAACAGTTG
CTGGTCGAGC AAGGGCGACT GCAATTGGCC ATGAAGCAGA TTGAAATCAC CCAGAAAAAG
CTGCTCGAGT CCGAACACCG GCGGTCCGAG GCCGCCAAGC GCGGCATGGA GCAATTGCTT
GCCCAGATCA TCGATGGCGA TCCGGTGCCG ACCTTCGTGA TCGATGCCCA GCATCGGATC
ACCCATTGGA ACAAGGCTTG CGCCGTGGTC AGCGGCCTGT CCAGCGCAGA GATGGTGGGG
ACCCAGTTAC ACTGGAAGGC CTTCTACAAG GAATACCGCC CGGTGATGGC GGACCTGATC
GTCAATGGCA GCCTGGAAGC GCAGTACGAG GAATATTACA AGGATCGCTT CAGGCGCTCT
TCATTGATTC AGGATGCGTT TGAAGGCGAG GCCTTTTTTG AAGGCCTGGG GCCGAATGGC
TTGTGGCTGG CTTTCACGGC AGCCCCGCTA CGCAACGCCA ATGGTGAGTT GATCGGTGCA
ATCGAGACCT TGCAGGACGT CACCGAACGG CACCGCGCCC AGGAAAGCTT GCTGCAACAC
CAGAACCAGC TGGAAAGCCT GGTCGTTCAA CGCACGACCC AGTTGGCCAC CGCCAATACC
GAACTGGAAA ACGAGCGGCG CGAGCTCGAA GTCCTGCTTT CAAAAATTGA AGAAGCCCAG
CAGCAATTGC TGCAGTCGGA AAAAATGGCG GCAATTGGCC AACTCGCGGC TGGCGTCGCC
CACGAAATCA ACAACCCTGT CGGCTTCGTC AACTCCAACC TGGGAACGCT GAAGACCTAT
ATCAACAACC TGCTCGGCGT CGTCGACGCC TATGAAGCGG TCGCGGCAGG CGGCGACCCT
GCCCAAATTG AGGCTGCCCG GCGAGCGGCC GACATCGACT TTCTGCGTGA AGACCTGCCT
TCCCTGCTCA TCGAATCCCA GGAGGGCTTG GGACGCGTGA CCAAGATTGT CCAGGACCTC
AAGGACTTTT CCCGTGTCGA TCAGGCCGAA TATCAACTGG CCAATCTCAA CGCTGCCCTG
GAAAGCACCC TGAACGTTGT CTGGAACGAG TTGAAATACA AAGCCGACGT GGTCCGCGAT
CTGGGCGATA TCCCTGAAGT CGAGTGTGTA CCGGCCCAGA TCAACCAGGT TTTCATGAAC
TTGCTGGTCA ATGCCGCACA GGCCATCGAG ACACACGGCA GGATCACGGT CCGTTCCGGC
CAGGAGAACG CCCATGTCTG GTTCGAGATT TCCGACACCG GTAAAGGCAT GACGGCGGAA
GTATGCCACC GCGTATTCGA CCCCTTCTTC ACCACCAAGC CGGTCGGCCA GGGTACCGGC
CTCGGGCTGT CGATCTCCTA CGACATCATT GTCAAAAAAC ATCGAGGACG TTTCGATGTC
GCCAGCACCC CGGGCCAAGG AACAACTTTC AAGTTCTGGC TACCGATTCA GGGCGTGGAA
AAATGA
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| Protein sequence | MDAFVWNERY MTGEAQVDEE HQELVRIINW VIEHQSVPAQ DDDIQRVLAS LANYAVMHFG
HEEELMEQMH CDPRFIQAHV AVHQEFARQV GKMLEFQGGK ADVEYLLRFL SSWLAHHILG
IDQSMARQIA KIRAGAAPEA AFEAEKRIPH DPSTASLLDA MNALFRMVAS RNEALEKLNA
SLGAQVAAQT ADLMQSNQQL LVEQGRLQLA MKQIEITQKK LLESEHRRSE AAKRGMEQLL
AQIIDGDPVP TFVIDAQHRI THWNKACAVV SGLSSAEMVG TQLHWKAFYK EYRPVMADLI
VNGSLEAQYE EYYKDRFRRS SLIQDAFEGE AFFEGLGPNG LWLAFTAAPL RNANGELIGA
IETLQDVTER HRAQESLLQH QNQLESLVVQ RTTQLATANT ELENERRELE VLLSKIEEAQ
QQLLQSEKMA AIGQLAAGVA HEINNPVGFV NSNLGTLKTY INNLLGVVDA YEAVAAGGDP
AQIEAARRAA DIDFLREDLP SLLIESQEGL GRVTKIVQDL KDFSRVDQAE YQLANLNAAL
ESTLNVVWNE LKYKADVVRD LGDIPEVECV PAQINQVFMN LLVNAAQAIE THGRITVRSG
QENAHVWFEI SDTGKGMTAE VCHRVFDPFF TTKPVGQGTG LGLSISYDII VKKHRGRFDV
ASTPGQGTTF KFWLPIQGVE K
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