| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0939 |
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| Symbol | carB |
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| ID | 3570253 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 1018631 |
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| End bp | 1021837 |
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| Gene Length | 3207 bp |
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| Protein Length | 1068 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 637679397 |
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| Product | carbamoyl phosphate synthase large subunit |
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| Protein accession | YP_284165 |
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| Protein GI | 71906578 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0458] Carbamoylphosphate synthase large subunit (split gene in MJ) |
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| TIGRFAM ID | [TIGR01369] carbamoyl-phosphate synthase, large subunit
[TIGR01435] glutamate--cysteine ligase/gamma-glutamylcysteine synthetase, Streptococcus agalactiae type |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.245842 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCGAAAC GTACAGACAT AAAAAGTGTT TTGATTATTG GCGCCGGCCC GATCATCATC
GGTCAGGCCT GCGAATTCGA CTACTCCGGC GCGCAAGCCT GCAAGGCGTT GCGCGAAGAG
GGTTACAAGG TCATTCTGGT CAACTCCAAT CCGGCGACCA TCATGACCGA CCCGGAAATG
GCCGATGTCA CCTACATCGA GCCGATCACC TGGCAGGTTG TCGCCAAGAT CATCGAAAAA
GAACGCCCGG ACGCGCTGCT GCCGACCATG GGTGGCCAGA CCGCGCTGAA CTGCGCGCTC
GATCTCGACC GCGAAGGCGT GCTCGCCAAG TTCAACGTCG AGCTGATCGG TGCTTCCAAG
GAAGCGATCG ACAAGGCCGA AGACCGTCAG AAGTTCAAGG ATGCGATGAC CAAGATTGGT
CTCGGTTCCG CCAAGTCTGC CACCGCGCAC AGCATGGAAG AGGCTTACCA GGTGCAGGCC
GTGATCGGCT TCCCGACCAT CATCCGGCCC TCCTTCACGC TGGGCGGTAC GGGCGGCGGC
ATCGCCTACA ACATGGAGGA GTTCGAGATC ATCTGCAAGC GCGGTCTCGA AGCATCGCCG
ACCAACGAGC TGCTGATCGA GGAATCGCTG CTCGGCTGGA AGGAATACGA GATGGAAGTC
GTCCGTGACA AGGCGGACAA CTGCATCATC ATCTGTTCGA TCGAGAACCT CGATCCGATG
GGCGTGCACA CCGGCGACTC GATTACCGTT GCGCCGGCTC AGACGCTGAC CGACAAGGAA
TACCAGATCC TGCGTAACGC CTCGATCGCC GTGTTGCGCG AGATTGGTGT CGATACGGGG
GGGTCCAACG TCCAGTTCTC GATCAACCCG AAGGACGGTC GGATGATCGT CATCGAGATG
AACCCGCGTG TTTCGCGTTC GTCGGCCCTG GCCTCCAAGG CGACCGGCTT CCCGATCGCC
AAGATCGCCG CCAAGCTGTC GGTCGGCTAC ACGCTGGATG AACTGTCGAA CGACATCACC
GGCGGCAAGA CGCCGGCCTC ATTCGAGCCC TCCATTGACT ACGTCGTGAC CAAGGTGCCG
CGTTTCGCCT TCGAGAAATT CCCGCAGGCC GATTCGACGC TGACCACGCA GATGAAATCG
GTTGGCGAAG TGATGGCTAT CGGTCGCACT TTCCAGGAAT CGCTGCAGAA AGCCTTGCGC
GGTCTGGAAG TGGGTGTCGA TGGCTTCAAC CTGAAAACGG TCGATCCGGA AACCATCGAC
GAACAACTGG CCCGGCCGAC GCCGGATCGC CTGTGGTACG TCGCTGACGC CTTCGGGATC
GGCATGTCGG TCGAAAAAGT GTTTGACCTG ACCAAGATTG ATCCGTGGTT CCTGGTCCAG
ATCAAGGAGA TCGTCGATCT CGAACTGGCT GTTGAAAAAC GTGAATTTTC TTCGTTGACC
GCAGAAGAGC TGCGTTATCT CAAGCGTAAG GGATTTGCCG ACCGTCGTCT GGCTCACCTG
ACCAAGACCA GTGAAACCGC TGTCCGCGAG CGTCGCCATG AACTCAAGGT GCGTCCGGTC
TACAAGCGCG TTGACACCTG CGCTGCCGAG TTTTCGACCG GTACTGCCTA CATGTACTCG
ACCTACGAGG ACGAGTGCGA GGCCATGCCG ACCGACAAGA AGAAGATCAT GGTGCTCGGC
GGCGGTCCGA ACCGCATCGG TCAGGGCATC GAGTTCGACT ACTGCTGCGT GCATGCCGCG
ATGGCGATGC GCGAGGATGG TTACGAGACC ATCATGGTCA ACTGCAATCC GGAAACCGTT
TCCACCGACT ACGACACCTC CGACCGTCTG TACTTCGAGC CGCTGACGCT GGAAGACGTG
CTGGAAATCT GCGCGATCGA AAAGCCGGTC GGCGTGATTG TCCAGTACGG TGGCCAGACC
CCGCTCAAGC TTGCGCTGGC GCTGGAAGCC AATGGCGTGC CGATCATCGG CACGACGCCG
GAGTCTATCG ACATCGCCGA AGACCGCGAG CGCTTCCAGA AGCTGCTGCA CGATCTCGGC
CTGAAGCAAC CGCCGAATCG TACCGCTCGT ACCGAAGAGG ATGCGCTGCG TCTGGCTCAG
GAGATCGGTT ATCCGCTGGT TGTTCGTCCG TCCTACGTGC TGGGCGGCCG GGCCATGGAA
ATCGTCCATG AGCAGAAGGA CCTCGAGCGC TACATGCGCG AGGCGGTCAA GGTCTCCAAT
GACTCGCCGG TGCTGCTCGA CCGCTTCCTG AACGACGCCG TCGAGTGTGA CGTCGATGCG
CTTTCCGATG GCGAAGAAGT GATCATCGGT GGCGTCATGG AGCACATCGA ACAGGCGGGC
GTGCACTCTG GTGACTCGGC CTGCTCGCTG CCGCCGTATT CTTTGTCGGC CGCCGTGCAG
GACGAACTGC GTCGCCAGAC CAAGCTGATG GCCAAGGCGC TGAATGTTTG CGGCCTGATG
AACGTCCAGT TCGCCATCAA GGACAACGAT GTCTACGTGC TGGAAGTGAA TCCGCGTGCG
TCGCGCACCG TGCCTTTCGT TTCCAAAGCG ACTGGCCTGC AACTGGCGAA GATTGCCGCC
CGCTGCATGG CGGGGCGCAG CCTGAAGGAC CAAGGTATTA CCAAGGAAAT CATTCCACCG
TATTACTCGG TCAAGGAAGC AGTCTTCCCC TTCGTCAAAT TCCCGGGCGT CGATACCATT
CTTGGGCCGG AAATGAAGTC GACCGGCGAA GTCATGGGGG TTGGTGTCAC CTTTGCCGAA
GCCTTCGTCA AGTCGCAACT CGCTGCTGGC GTCAAGCTGC CAAAGTCCGG CAAGGTCTTC
CTGTCAGTCA AGGATAGCGA TAAGGCCAAG GCGATCGAGA TCGCCCGCCA CCTGCACGAT
GCCGGTTTCC ATCTTGCGGC AACGCGCGGT ACTGCGCACG CCATAGAGGC TGCCGGTCTG
CCGGTGCAGT CGGTTAACAA GGTGACCGAA GGTCGTCCGC ACATTGTCGA CATGATCAAG
AACAACGAAA TCGCACTGAT CATCAATACG GTGGAGGAAA AACGCGGTGC AATCAACGAC
TCGCGTTCGA TCCGCACCTC GGGCCTGCAG GCACGGGTGA CCATGTATAC GACGATTTGG
GGCGCCGAAG CCGCAGCTGA AGGTATCCGT CATCTGGGCG AGCTGGTGGT GTATCCGATT
CAGGCGCTGC ACGAGCAGCT TCACTAA
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| Protein sequence | MPKRTDIKSV LIIGAGPIII GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPEM
ADVTYIEPIT WQVVAKIIEK ERPDALLPTM GGQTALNCAL DLDREGVLAK FNVELIGASK
EAIDKAEDRQ KFKDAMTKIG LGSAKSATAH SMEEAYQVQA VIGFPTIIRP SFTLGGTGGG
IAYNMEEFEI ICKRGLEASP TNELLIEESL LGWKEYEMEV VRDKADNCII ICSIENLDPM
GVHTGDSITV APAQTLTDKE YQILRNASIA VLREIGVDTG GSNVQFSINP KDGRMIVIEM
NPRVSRSSAL ASKATGFPIA KIAAKLSVGY TLDELSNDIT GGKTPASFEP SIDYVVTKVP
RFAFEKFPQA DSTLTTQMKS VGEVMAIGRT FQESLQKALR GLEVGVDGFN LKTVDPETID
EQLARPTPDR LWYVADAFGI GMSVEKVFDL TKIDPWFLVQ IKEIVDLELA VEKREFSSLT
AEELRYLKRK GFADRRLAHL TKTSETAVRE RRHELKVRPV YKRVDTCAAE FSTGTAYMYS
TYEDECEAMP TDKKKIMVLG GGPNRIGQGI EFDYCCVHAA MAMREDGYET IMVNCNPETV
STDYDTSDRL YFEPLTLEDV LEICAIEKPV GVIVQYGGQT PLKLALALEA NGVPIIGTTP
ESIDIAEDRE RFQKLLHDLG LKQPPNRTAR TEEDALRLAQ EIGYPLVVRP SYVLGGRAME
IVHEQKDLER YMREAVKVSN DSPVLLDRFL NDAVECDVDA LSDGEEVIIG GVMEHIEQAG
VHSGDSACSL PPYSLSAAVQ DELRRQTKLM AKALNVCGLM NVQFAIKDND VYVLEVNPRA
SRTVPFVSKA TGLQLAKIAA RCMAGRSLKD QGITKEIIPP YYSVKEAVFP FVKFPGVDTI
LGPEMKSTGE VMGVGVTFAE AFVKSQLAAG VKLPKSGKVF LSVKDSDKAK AIEIARHLHD
AGFHLAATRG TAHAIEAAGL PVQSVNKVTE GRPHIVDMIK NNEIALIINT VEEKRGAIND
SRSIRTSGLQ ARVTMYTTIW GAEAAAEGIR HLGELVVYPI QALHEQLH
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