Gene Daro_0937 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0937 
Symbol 
ID3570251 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp1014784 
End bp1017342 
Gene Length2559 bp 
Protein Length852 aa 
Translation table11 
GC content57% 
IMG OID637679395 
Productresponse regulator receiver:ATP-binding region, ATPase-like:histidine kinase A, N-terminal:Hpt 
Protein accessionYP_284163 
Protein GI71906576 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID[TIGR00229] PAS domain S-box 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value0.661814 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCCA AGCTGCTCGC GAAACAGCTT CAGGAAATCT TCGGCGGCGA AGGTGCGCCG 
CAATTCCTGA TGCTGCTCGA GCAAGCGCGC GCCGCACAGC AGCATGCCTT GGCGGATGGA
ACCGAAAAAC TGCTGGGTAC GGTCGATTCG ACCTATCGGG CTTATGCCGG CCTCAATCTC
AGTGGCTGGC ATACCAAGCT CTCCGGTGAC GCTCTCACGG ACTGGAACAT CGGCAGTGGC
ACCATCGATT CCGGGCGCCA ATGGAAAGAG ATGCTTGGTT ATGCCGATGG CGATCTCGAT
AACTCGATCG CGCAGTGGCA GCGCATGGTG CATCCCGACG ACTTGCGTCT GCTGCAGACA
CGAATCGAGG CGCACATTCA GAACCAGGAC AGTCACTTTC AGGCCGAGTG CCGCTTCAAG
GCGCGTGACG GCCAGTGGCG CTGGTTTCTT TTGCGCGGTG CAGTGGCCGC CCGTAATGCC
GAAGGGAAAC CGGCACGGGT GTTGGTGTTG CAACGAGATA TCAGCGACGT CAAGGCGGCA
GAATCGGCGC TAATCTCGGC GAAAGAAGTG GCCGAATCAG CCAACAAGGC GCGCGGGGCT
TTTTTGGCCA ATATGAGCCA CGAAATCCGG ACGCCGATGA ACGGCATTAT CGGCATGACC
GAATTGGCGC TCGATACGCA ACTGGATGCC GAGCAACGCC ACTATCTGAA AACGGTCAAA
TCGTCCGCCG AGGCGCTGCT GACCATCGTT AACGATATTC TGGATTTCTC GAAAATCGAA
GCCGGCAAGA TGGAGTTCGA GTCGCTGGTT TTTTCGATGC AGGACACTGT CCTTGAGGCT
GTGCGGGTCT TGGCGGTCAG CGCTCACAAG AAGGGGCTTG AGCTGGTGGC GGATGTTCGC
CCCGAAGTGC CGGCTCGCAT TGTTGGCGAC CCGACGCGCT TGCGTCAGGT GATCATCAAT
CTGATCGGCA ATGCCATCAA ATTTACCGAG CGGGGCGAGG TGGCGCTCAA GGTTGAAGTC
GATCAGTCAA CAGAACGCTC GGTTTATCTC CGGTTTTCGA TCCGGGATAC CGGAATAGGT
GTTCCCGCGG ACAAGCAGCA GGCGATTTTT GAGGCGTTTT CACAGGCCGA TGTGTCCACT
ACCCGCCGCT TTGGCGGAAC GGGATTGGGG CTGGCGATCA GCGCGCGCCT CGTTCAACTG
ATGGATGGCA AGATCTGGCT CGAGAGTACC CCGGGGCAAG GTTCTGTTTT TTCTTTTACC
GGACGCTTCG GGGTTCAGGA GGCGACATCG GTACGCCCCT TCGAAGCGAG GTTTGGCGGT
CGGCGCGTCT TGGTGATCGA AGATAACGCG ACCGTCGGGC AATATCTGGT CGAGCTCCTG
GAGCAGCTTG GTGTTCAGGT TTCCCTTGTG GCGGATGGGG CGGCTGCGGT TGCAGCGATG
GAACGAAGTC GGGCGATGGA TTTTCCCTAC GACTATGTTC TTGCCGATGC CAATATGGAT
GCTCCGGCAG GGTTCGCGTT GGCTGAGGCT TGGGGGCGGT CCGGTCGGGT GGAAAAACTG
ATTGTTATGC TGACGACTGA AAATCAGCGG CATGATCTGA GTCGACTGCG TGAAATCGGG
GTTTCTGCCC ACTTGGTCAA GCCGATCGGT GGGGCTGATT TGATTGACGC TTTGGCGCTT
GCTGATGGGC CCGGCAACCA GGAGTTGAGC GAATTTGCTC TTTCGGAAAT CAATTTTGAC
GGGGTGGCCA AAGAGGATTC TTCCGGGCTG AATATCCTGC TGGTTGAGGA TAATCCGGTC
AATCAGGAGC TTGCGACTCG TCTTTTGGAG CGTCAGTCGC ATCGGGTATC CCTGGCAAAC
AACGGGGCGG AAGCCGTCGA TTTGTTTGAT AGTGGCCATT TCGATGTCAT CCTGATGGAT
ATGCAGATGC CGGTGATGGG CGGCATCGAG GCGACTGAAG CAATTCGGTC TCGCGAAATG
CGGCGGAGCT GGGTTGTCTC ACATGAGCTC AAGCCAGTCT ACATCATCGC AATGACGGCT
AACGTCATGG CGACAGATCG TGATCGTTGT CTGGAGGCGG GAATGAATGA CTATGTCGCC
AAGCCTTTGC GTTCTGAAGA GTTGTATGCC GCGCTGGAAC GTGCACGAGG TGGCCTTGCC
ACTGACGACT TCATTGTTAA CGATGCGCCG CTTGTTGATG CGTCTTCGCA ACTCGATCTG
GGGGCTGCAC TGGGTGATAT CGGTGAGCCG GAATTATTTG CGACCATGGC TGGCATGTTG
CTGGCGGAGT GGGACGCTCA TTTGGGGCGG GTAAGAACCG CTATTGATGC GACTGATGCC
CATGAGGCGC GGATGCACGC CCATACGCTG AAAAGTCTGC TGGCGATGTT CCATGCCGAG
CGTGCACGGC GTCGTGCCAT GGAAATCGAG CAGGCGACGA TGACGGTTGA AAATGTCGAT
TGGGCCAACT GTCGCCGTCT CTACGCCGCC TTGATGGAGG AAATGGCGTT GATCAAACCT
TCGTTGATAC GCTATGTTGA GACGCGTGTA ATCCCTTGA
 
Protein sequence
MKSKLLAKQL QEIFGGEGAP QFLMLLEQAR AAQQHALADG TEKLLGTVDS TYRAYAGLNL 
SGWHTKLSGD ALTDWNIGSG TIDSGRQWKE MLGYADGDLD NSIAQWQRMV HPDDLRLLQT
RIEAHIQNQD SHFQAECRFK ARDGQWRWFL LRGAVAARNA EGKPARVLVL QRDISDVKAA
ESALISAKEV AESANKARGA FLANMSHEIR TPMNGIIGMT ELALDTQLDA EQRHYLKTVK
SSAEALLTIV NDILDFSKIE AGKMEFESLV FSMQDTVLEA VRVLAVSAHK KGLELVADVR
PEVPARIVGD PTRLRQVIIN LIGNAIKFTE RGEVALKVEV DQSTERSVYL RFSIRDTGIG
VPADKQQAIF EAFSQADVST TRRFGGTGLG LAISARLVQL MDGKIWLEST PGQGSVFSFT
GRFGVQEATS VRPFEARFGG RRVLVIEDNA TVGQYLVELL EQLGVQVSLV ADGAAAVAAM
ERSRAMDFPY DYVLADANMD APAGFALAEA WGRSGRVEKL IVMLTTENQR HDLSRLREIG
VSAHLVKPIG GADLIDALAL ADGPGNQELS EFALSEINFD GVAKEDSSGL NILLVEDNPV
NQELATRLLE RQSHRVSLAN NGAEAVDLFD SGHFDVILMD MQMPVMGGIE ATEAIRSREM
RRSWVVSHEL KPVYIIAMTA NVMATDRDRC LEAGMNDYVA KPLRSEELYA ALERARGGLA
TDDFIVNDAP LVDASSQLDL GAALGDIGEP ELFATMAGML LAEWDAHLGR VRTAIDATDA
HEARMHAHTL KSLLAMFHAE RARRRAMEIE QATMTVENVD WANCRRLYAA LMEEMALIKP
SLIRYVETRV IP