Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0909 |
Symbol | |
ID | 3570066 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 985605 |
End bp | 986351 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637679367 |
Product | ABC transporter related |
Protein accession | YP_284135 |
Protein GI | 71906548 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 0.179486 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCCAACG TACTCGAAGT GAAGGACCTC TCGGTCGCCT ATGGCAAGGT CGAGGCGGTC AGCAAGATCA GTCTGGAAGT GGGCGAGGGA AAGATCGTCA CAGTGATTGG CCCGAACGGC GCCGGCAAAA CGACGACGCT GTCGGCGATC ATGGGTCTGC TGCCGTCGTC CGGCCAGGTG GCCTTCGATG GCAGCATCGA GCAGGTGCCG GAAGTCGAAC GGATGGTCGT GCGTGGCATG AATCTGGTGC CGGAAAAGCG CGAACTGTTC GGCACCATGA GCATCGAGGA CAATCTGCTG CTCGGTGCCT TTCAGCGCAA CCGCACCGGC CATCGCGACC ACTTGCAGAC GATGGACGAG GTCTATGCGC TGTTTCCGCG CCTCAAAGAA CGACGTCACC AGCAGGCCGG CACCATGTCC GGCGGTGAGC GGCAGATGCT GGCCGTCGGC CGGGCACTGA TGGCCAAACC CAAGCTGCTG ATGCTCGACG AGCCCAGCCT CGGTCTGGCC CCGCTGATCG TCCGCGAGAT CTTCCGCATT ATCGGCGAGC TGCGCCGGCG AGGTGTTTCG ATCCTGCTGG TCGAACAGAA TGCCCGCGCC GCCCTGCAGG TGGCCGACTA CGCCTACGTG CTGGAAAACG GGGCGGTCAA GATGCAGGGC GACGCGGAAA TGCTGCGCAA TGATCCGCGC GTGATCGAGA GCTACCTCGG CCTCGCCAGC AAACACCAGG AAATGCTTTC GACCTGA
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Protein sequence | MANVLEVKDL SVAYGKVEAV SKISLEVGEG KIVTVIGPNG AGKTTTLSAI MGLLPSSGQV AFDGSIEQVP EVERMVVRGM NLVPEKRELF GTMSIEDNLL LGAFQRNRTG HRDHLQTMDE VYALFPRLKE RRHQQAGTMS GGERQMLAVG RALMAKPKLL MLDEPSLGLA PLIVREIFRI IGELRRRGVS ILLVEQNARA ALQVADYAYV LENGAVKMQG DAEMLRNDPR VIESYLGLAS KHQEMLST
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