Gene Daro_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0872 
Symbol 
ID3569935 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp944543 
End bp945412 
Gene Length870 bp 
Protein Length289 aa 
Translation table11 
GC content60% 
IMG OID637679330 
Productacetyl-coenzyme A carboxylase carboxyl transferase subunit alpha 
Protein accessionYP_284098 
Protein GI71906511 
COG category[I] Lipid transport and metabolism 
COG ID[COG0777] Acetyl-CoA carboxylase beta subunit 
TIGRFAM ID[TIGR00515] acetyl-CoA carboxylase, carboxyl transferase, beta subunit 


Plasmid Coverage information

Num covering plasmid clones62 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00845947 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCTGGC TGACCAAACT ACTGCCCCCA AAGATCAAGC GCGAACAGGG CCCACAGCGC 
CGCGGCAACC TGCCGGAAGG TCTGTGGAGC AAGTGTCCGT CCTGCGAGGC TGTGCTTTAC
GCCACCGATC TGGAAAACAA CCTGCAGGTC TGCCCCAAGT GTGGCCATCA CAATCGCCTG
AATTCGCGTC AACGTCTGGA TCTGCTGCTC GATTCGGAAG GCCGTTTCGA GATTGGTGCC
GAGGTTTTGC CGGTCGATAG TCTGAAGTTC AAGGATTCCA AGAAGTACCC GGACCGCCTG
ATGGAAGCCA ATGAGTCCAC TGGTGAGAGC GATTCGCTGG TTGTCCTGCA AGGCGCCATC
AAGACCATGC CGGTTGTTGC GGCGGCTTTT GAGTTCGACT TCATGGGCGG TTCGATGGGC
TCGGTGCTCG GCGAGCGTTT CGTGCGCGGC GTGCAGGCGG CGGTTGAGCA GAAAATGCCC
TTCATCTGCA TTACCGCTTC CGGTGGCGCG CGGATGCAGG AAGGTTTGTT CTCGCTGATG
CAGATGGCCA AGACGACCGC TGCATTGACC AAGCTTTCTG CGGCTGGCCT GCCTTTCATC
TCCATTCTGA CCGACCCGAC CATGGGCGGC GTTTCCGCGT CCTTTGCCTT TGTCGGTGAT
GTGGTGATTG CCGAGCCAAA GGCGCTGATC GGCTTTGCCG GCCCGCGCGT GATCGAGCAG
ACCGTGCGCG AGACGTTGCC GGAGGGCTTC CAGCGCTCCG AATTCCTGCT GGAAAAGGGC
GCCATCGACA TGATTGTCGA TCGTCGCGAA CTGCGCGATC AGGTTGCCCG AGTTCTGGCC
CTGCTGCAAA AGCTGCCGGC TGCCGCTTGA
 
Protein sequence
MSWLTKLLPP KIKREQGPQR RGNLPEGLWS KCPSCEAVLY ATDLENNLQV CPKCGHHNRL 
NSRQRLDLLL DSEGRFEIGA EVLPVDSLKF KDSKKYPDRL MEANESTGES DSLVVLQGAI
KTMPVVAAAF EFDFMGGSMG SVLGERFVRG VQAAVEQKMP FICITASGGA RMQEGLFSLM
QMAKTTAALT KLSAAGLPFI SILTDPTMGG VSASFAFVGD VVIAEPKALI GFAGPRVIEQ
TVRETLPEGF QRSEFLLEKG AIDMIVDRRE LRDQVARVLA LLQKLPAAA