Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0864 |
Symbol | |
ID | 3569851 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 935004 |
End bp | 936056 |
Gene Length | 1053 bp |
Protein Length | 350 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637679322 |
Product | 3-isopropylmalate dehydrogenase |
Protein accession | YP_284090 |
Protein GI | 71906503 |
COG category | [C] Energy production and conversion [E] Amino acid transport and metabolism |
COG ID | [COG0473] Isocitrate/isopropylmalate dehydrogenase |
TIGRFAM ID | [TIGR00169] 3-isopropylmalate dehydrogenase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 0.0000147801 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 6 |
Fosmid unclonability p-value | 0.00313755 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGAAGATTT GTGTTCTGCC GGGTGACGGC ATTGGTCCTG AAATTACCGC TCAAGCGGTG CGTGTGCTGA ATTCGCTCGA TCTCAAGTTC GAGATGGAAG AGGCGTTGCT CGGTGGTGGT GCTGTCGATG CGACTGGCAA TCCGTATCCC GAAGCCACCC AGAAGCTGGC TCGCGCTGCT GACGCTGTGC TGCTCGGTGC CGTTGGTGGC CCCAAGTGGG ACTCGCTGCC GCGCGAACAG CGCCCGGAAC GCGGCCTGCT GGGCATCCGC AAGGATCTGA ACTTGTTCGC CAACCTGCGT CCGGCCATTC TCTACCCGGA ACTGGCCAAT GCTTCGACGT TGAAGCCGGA AGTGGTTGCC GGGCTGGATA TCCTGATCAT CCGCGAACTG ACCGGCGATA TCTATTTCGG CCAGCCGCGT GGTGTGCGCG AAGAAAATGG CGAACGCGTC GGCTTCAACA CCATGGTCTA TAGCGAGTCG GAAATCCGCC GCATTGGCCA TGTCGCCTTC CAGGCCGCCC AAAAGCGCGA CAAAAGGCTG TGTTCAGTCG ACAAGATGAA CGTGCTGGAA TGCACCCAGC TCTGGCGCGA CGTGATGATC GAGATTTCAC GCGATTACCC GGATGTCGAA CTCAGCCACA TGCTGGTCGA TAACGCTGCC ATGCAACTGG TCAAGGCGCC GAAGCAGTTC GACGTGATGG TCACCGGCAA CATGTTTGGC GACATCCTGT CCGACGAAGC TTCGATGCTG ACCGGTTCGA TCGGCATGCT GCCGTCAGCC TCGCTGGACG ACAAGAACAA GGGACTCTAC GAGCCATCGC ACGGCTCGGC GCCGGACATC GCCGGTAAGG GCGTCGCCAA TCCGCTGGCG ACCATCCTGT CTGCGGCGAT GATGCTGCGT TACACCTTCG GCCTCGAAGA GCAGGCACTT CGTGTCGAAA ACGCGGTCAA AAAAGTCTTG GCCCAAGGTT ATCGTACTGG CGACATCTAC GAGCGTGGCA CGAACAAGGT CGGCACCAGG GAAATGGGCG ACGCCGTGCT GGCGGCGCTG TAA
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Protein sequence | MKICVLPGDG IGPEITAQAV RVLNSLDLKF EMEEALLGGG AVDATGNPYP EATQKLARAA DAVLLGAVGG PKWDSLPREQ RPERGLLGIR KDLNLFANLR PAILYPELAN ASTLKPEVVA GLDILIIREL TGDIYFGQPR GVREENGERV GFNTMVYSES EIRRIGHVAF QAAQKRDKRL CSVDKMNVLE CTQLWRDVMI EISRDYPDVE LSHMLVDNAA MQLVKAPKQF DVMVTGNMFG DILSDEASML TGSIGMLPSA SLDDKNKGLY EPSHGSAPDI AGKGVANPLA TILSAAMMLR YTFGLEEQAL RVENAVKKVL AQGYRTGDIY ERGTNKVGTR EMGDAVLAAL
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