| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0847 |
|---|
| Symbol | |
|---|
| ID | 3569663 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 920567 |
|---|
| End bp | 921691 |
|---|
| Gene Length | 1125 bp |
|---|
| Protein Length | 374 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637679304 |
|---|
| Product | NlpBDapX lipoprotein |
|---|
| Protein accession | YP_284073 |
|---|
| Protein GI | 71906486 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3317] Uncharacterized lipoprotein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 5 |
|---|
| Fosmid unclonability p-value | 0.00165438 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGAATCGTC GGCTTTCCGG CCTCGCCCTT TCCCTGCTGG CATTAGCGCT GGCCGGATGC
GGCATTCTCC CTGACTCCCG CAAGATCGAA TACAAGTCGG CCGGCAAAGC GCCGACGCTT
GAAGTGCCTC CAGACCTGAC GCAGATCACT CGTGATGACC GCTATCTGGT GCCCGATGCC
GCCGGCAAGG GCAGTGCGAC ATTCTCGGCC TACAGCGCCG ACCGGACCCC GCTGGCCCAG
GCGCAGAATT CCGTGGTGCT GCCGCAGGTC GACAAAGTTC GTGTCGAACG CTCTGGCAAT
CAGCGTTGGC TGGTCGTTGC CGTTCCGGCA GATAAGCTGT GGGATACGGT CAAGGACTTC
TGGCAGGAAA CCGGCTTCAT CATTTCGGTC GAACGCCCCG AAGCTGGTGT GATGGAAACC
GACTGGGCCG AAAACCGCGC CAAGATCGGC CAGGATTTCA TTCGCAATAC GCTGGGCAAG
TTGCTGGACT CCCTCTACTC GACAGGGGAG CGGGACAAAT TCCGCACTCG CTTCGAGCCG
GGTACTACGC CGGGAACGAC TGACGTTTTC ATCAGCCACC GTGGCATGGA AGAGGTCTAT
ACCTCATCGG CCAAGGATGA TACCCGGTGG CAGCCGCGTG CTGCTGATCC GGAGCTGGAA
GCAGAAATGC TGCGCCGCCT GATGGTGCGC CTGGGTTCTG AAGAAAAACG AGCCGAAGTC
TCGCTCGCTG CCGCCAAGGC TGAACCGCGC GCCAAGCTGG CCAAATCCGA TGATGGCGCC
GGAACCCTGG AGGTATTCGA ACGTTTTGAC CGTACTTGGC GTCGTGTCGG TCTGGCGCTG
GATCGCGTCG GCTTTACCGT CGAAGATCGT GACCGTTCGC GTGGCCTGTA CTTCGTGCGT
TACGTCGACC CGGAAGTCGA TAACCGCAAG AAGGATGATG GTTTCCTGTC CAAGCTGACC
TTCTGGAAGA GCGCTGAGCC GGCCAGTTCC AAGGTGCAGT ACCGCATCTA CGTCAGCGAA
GATGGGCAAC AGAGTGTTGT CAAGGTTCTG TCCAGCGAGG GCGGTACCGA CAAGTCGGAA
ACTGCAAAGA AGATTCTCGG CCTGCTCCTT CAGCAGTTGC AGTGA
|
|---|
| Protein sequence | MNRRLSGLAL SLLALALAGC GILPDSRKIE YKSAGKAPTL EVPPDLTQIT RDDRYLVPDA
AGKGSATFSA YSADRTPLAQ AQNSVVLPQV DKVRVERSGN QRWLVVAVPA DKLWDTVKDF
WQETGFIISV ERPEAGVMET DWAENRAKIG QDFIRNTLGK LLDSLYSTGE RDKFRTRFEP
GTTPGTTDVF ISHRGMEEVY TSSAKDDTRW QPRAADPELE AEMLRRLMVR LGSEEKRAEV
SLAAAKAEPR AKLAKSDDGA GTLEVFERFD RTWRRVGLAL DRVGFTVEDR DRSRGLYFVR
YVDPEVDNRK KDDGFLSKLT FWKSAEPASS KVQYRIYVSE DGQQSVVKVL SSEGGTDKSE
TAKKILGLLL QQLQ
|
|---|
| |