Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0846 |
Symbol | dapA |
ID | 3569662 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 919673 |
End bp | 920551 |
Gene Length | 879 bp |
Protein Length | 292 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637679303 |
Product | dihydrodipicolinate synthase |
Protein accession | YP_284072 |
Protein GI | 71906485 |
COG category | [E] Amino acid transport and metabolism [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 58 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.00144357 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGATTACCG GATCCATTGT CGCCATCGTT ACGCCCATGC ATGAGGATGG CAGCCTCGAT TTGAACTCCT TTCGCAATCT GCTCGACTTC CATGTGCAGG AAGGCACTGA TGCCATCGTA GTCGTTGGTA CGACCGGCGA ATCGCCGACG GTCAATGTCG AGGAGCATTG TGAACTGATC AAGATCGCCG TTGATCATGT CGCCGGCCGC ATTCCGGTCA TTGCCGGAAC CGGAGCCAAT TCGACGGCTG AAGCCATCGA GCTGACCGAG TTCGCCAAGA AGGCCGGTGC CAACATGGCG CTGTCCGTCG TGCCCTACTA CAACAAGCCG ACCCAGGAAG GCCTCTATCG CCATTTCAAG GCGATTGCCG AAGCGGTCGA GCTGCCGGTC ATTCTCTACA ACGTGCCGGG TCGTACTGTG GCCGACATGT CCAACGACAC CATTCTGCGC CTGGCCGAAG TGCCGGGCAT CGTCGGTGTC AAGGATGCGA CCGGCAACAT CGATCGGGCC TGTGATCTGA TCGCCCGTGC CCCGAAGGAT TTCGCGCTTT ACACCGGCGA TGACATGACG GCTGTGGCGA CGATCAGTCT CGGTTTCCAC GGCGATATAT CGGTGACGGC CAATGTGGCA CCGCGCCTGA TGCATGAAAT GTGCGTCGCC GCTGCCAGTG GCGACATCGC CAAGGCCCGG GAAATTCACT TCAAAGTGCT TGCCTTGCAC CGCGATCTGT TCTGCGAAGC CAATCCAATC CCGGTCAAGT GGGCTGTGCA CAAGCTGGGC CTGATGCCCA ATGGCATCCG CCTGCCCCTG ACCACGCTTT CCGAAGCCAA TCAACCACGT GTCCTGGCTG CGTTGCGCCA GGCCGGCCTC GTCGCCTGA
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Protein sequence | MITGSIVAIV TPMHEDGSLD LNSFRNLLDF HVQEGTDAIV VVGTTGESPT VNVEEHCELI KIAVDHVAGR IPVIAGTGAN STAEAIELTE FAKKAGANMA LSVVPYYNKP TQEGLYRHFK AIAEAVELPV ILYNVPGRTV ADMSNDTILR LAEVPGIVGV KDATGNIDRA CDLIARAPKD FALYTGDDMT AVATISLGFH GDISVTANVA PRLMHEMCVA AASGDIAKAR EIHFKVLALH RDLFCEANPI PVKWAVHKLG LMPNGIRLPL TTLSEANQPR VLAALRQAGL VA
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