| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0761 |
|---|
| Symbol | |
|---|
| ID | 3569221 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 830981 |
|---|
| End bp | 831763 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637679210 |
|---|
| Product | flagellar biosynthesis protein FliR |
|---|
| Protein accession | YP_283987 |
|---|
| Protein GI | 71906400 |
|---|
| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
|---|
| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 0.272612 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATCAGCA TTGGGTCCGC CCAGATTGAT GCGTGGATTG TGGCCTTTGT CTTTCCTCTG
GCCCGCATCT TGGGATTTAT TGCCGCCGCG CCGCTTTGGA GCACGGCAGG CATCCCGAGG
CGAACCCGCC TGATACTTGC CATCTCGATC GCAGTAGCCA TCACGCCGAC CCTGCCGCCA
ATGCCCGGCG TTCAACCCGG ATCGCTACCC GGCCTGTGGA TACTTGCGCA ACAGATGTTG
ATCGGGATCG GCATGGGATT CGCCGCCAAG ATCGTGTTCA CAGCTTTCGA CATAGCGGGC
GAATTTATCA GCTTCCAGAT GGGCTTGGGG TTTGCCACCT TTTACGACCC GCTCAATTCC
TCGCAAACGC CGGTCATCAC CGAGTTCATT AGCCTGATCG CCCTGCTCCT GTTTCTTTCC
ATGAACGGGC ACCTGCTTTA TCTGGCAACG CTGGCGCAGA GTTTTTCGGC TATCCCGGTT
AGCGCCACAC CGCTTGGCGC ATCCTCCTGG CTGAATTTGG CAGAACTAGG GAGCAAAATC
TTTTCGGCAG GGCTGTTGCT TTCGCTACCA ATCATTGTCG CTCTGATGAT TACCAATGTG
GCGCTGGCCG TTCTGACGCG AGCTGCGCCG CAGTTGAATC TATTTGCTCT CGGTTTCCCG
CTGACCTTGA TGGGAGGATT CGTTGCACTG GCCATCAGCC TGAACTACCT CGCCTCCCCA
CTGCAAGGTA TTTTTGAATT CGGCATGAGC GCCATGCTTG GATTTGCCAG CACTCAAAAC
TAG
|
|---|
| Protein sequence | MISIGSAQID AWIVAFVFPL ARILGFIAAA PLWSTAGIPR RTRLILAISI AVAITPTLPP
MPGVQPGSLP GLWILAQQML IGIGMGFAAK IVFTAFDIAG EFISFQMGLG FATFYDPLNS
SQTPVITEFI SLIALLLFLS MNGHLLYLAT LAQSFSAIPV SATPLGASSW LNLAELGSKI
FSAGLLLSLP IIVALMITNV ALAVLTRAAP QLNLFALGFP LTLMGGFVAL AISLNYLASP
LQGIFEFGMS AMLGFASTQN
|
|---|
| |