Gene Daro_0726 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0726 
Symbol 
ID3569117 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp794033 
End bp796387 
Gene Length2355 bp 
Protein Length784 aa 
Translation table11 
GC content55% 
IMG OID637679175 
ProductCheW-like protein:ATP-binding region, ATPase-like:Signal transducing histidine kinase, homodimeric:Hpt 
Protein accessionYP_283952 
Protein GI71906365 
COG category[N] Cell motility
[T] Signal transduction mechanisms 
COG ID[COG0643] Chemotaxis protein histidine kinase and related kinases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones45 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.550154 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTATCG ACATGAGTCA GTTCTACCAA GTGTTCTTCG ATGAATCGGC TGAGCACTTG 
GCTGCAATGG AGGGGCTGCT GCTTGATCTG GATATAGACA ATCCGGACTC AGAGCAACTC
AATGCTATTT TCCGTGCTGC GCACTCAATC AAAGGCAGCG CCGGGACGTT CGGGTTTACT
GACCTGGCGG AAACGACCCA TATTCTTGAA AACCTGCTTG ATCGAATTCG CAAGCAGGAA
CTCGGCTTGC GAGCCGATAT GGTCGATGCG TTTCTGGAGT GCGGTGATCT GTTGCGCGGC
ATGCTTGAGG CTCATCAGGG CCGGGGTGAA GCTGTTGATC CGCAGAGTGT GGCGTCAATT
TGTGCCCGAT TGCGCGAACT CTCTACCGAT CTGCCGCCTG ACTTGGCGCA GGGGGGGGGC
AAGGCTTTAG CGGAAGGCGT GGCAGCACCA TCTGTCGATA AGCGTGTTTT TGATATCCAG
TTTGTTCCGA CAGAAATTTC GGCAAAAGGT GATGGTGTCA CCAATCTACT GGACGAATTA
AAGTCGCTTG GCCAGTTGGA AATATTGAGC CAGCCGGATG CGGATATTCA TAGTGTGGGT
TACTGGCAGG TTCGTCTGAT CTCTGATCTT GGGCAGGAAG CATTTGCTGA TCAGATTGAT
TTCATCGCCG AAAACGGTGC CTGGCGAGTT GTCGAGGGCA AGCTTTCAGT CGGGGAGCCT
GATCCAGCCT TCGGTTTTTT TGATGACTCA CCGGGTACGC CCGATGACGA TCAGGGCTAT
GGCTTTTTTG CTCCACTCGA TCCTTCGCCG ATTGTAGAGA ACGCTGCAGC CTCTGAGCAG
GCTGGGGATG ATGGGTATGG TTTCTTTGAG GCCTTGCCGG CGACCAATGT TCCTGAATTG
ATGCCTTCCG TTGGTGCCGA TGATGAGGGC GATGGCTACG GTTTCTTTGC TCCTTTGTCC
GCTGCCGAAA AAACGCCTGA AGTATTGGAA GAGGGGGATG GCTTCGGATT TTTTGTTCCG
GTCTCGCCAT CGGCGGTGTC TAGTGTTCCA GCGACGCAGA TCCCATCGCT GATTGCAGAG
ATTGATTCTC CGTTACCTGC CGTTGTTCCG GAAAAATCGC CGGTCGAATC GCGAGCCCGT
GCGGCGAAGG CGGCTGGGCC TGCCGTTGCC GCAGGTGAAT CATCCATTCG TGTCAGCATT
GAGAAGGTCG ATCAATTGAT CAACCTGGTC GGCGAACTGG TCATAACGCA GGCGATGTTG
TTGCAAACTG CGACCCAGAT GCAGGAAAGT GCGCCTGAGC GACTGGTCAA CGGCTTGGCT
CAATTGGAGA GAAATACACG GGATTTGCAA GAGTCGGTCA TGTCTATCCG GATGATGCCG
ATTTCCTTCG TTTTCTCCCG CTTTCCACGA GTGGTGCGCG ATCTTTCGGG CAAGCTTGGC
AAACAGGTTG AGCTGAAGAC CTCTGGGGAA ACGACTGAAC TGGACAAGAG CCTGATCGAG
CGGATTGCCG ATCCACTGAC TCACCTCATC CGAAACAGTC TTGATCACGG CATCGAGTTA
CCTGAAAACC GTATTGCTGC CGGTAAGAGT CCGATCGGAA CCATCACCCT GAAGGCCTAT
CACCAAGGGG GGAATATCGT GATTGAGGTC GGTGACGACG GCGCTGGCCT GCCTCGTAAC
AAAATTCTTG CCAAGGCCCG GGAGCGAGGC TTCCAGGTCT CCGATCAGAT GACTGACTCG
GAGGTTTTTA ACCTCATTTT CGAGGCTGGC TTCTCGACTG CGGAACAAGT GACCGATGTC
TCTGGCCGGG GCGTCGGTAT GGATGTCGTG CGTCGTAACA TCCAGTCCAT GGGTGGGCGG
GTCGAGATTG AGTCGATGCT TGGGGTAGGC ACCCGGATGA CCGTTCGCCT GCCATTGACC
TTGGCGATTC TCGATGGCAT GTCAATTGCC CTTGGCGATC AGACCTATAT TCTGCCGCTC
TCCTACGTGA TCGAATCGTT CCAGCCGCGG ATGGGGGACA TCAAGACGCT TTCCAATCAG
GCGAGGGTGA TTCAGGTTCG GGGCGAATAC CTACCCGTTG TGGTCCTCCA CGAACTGTTC
AACATCAAGC CGAGTGCGAA TGATTTTACT CAGGGCATCA TGGTCGTGAT TGATGCGGAT
GGGGTCAAGG CGGCGCTGTT TGTCGATGCG CTGGTTGGAC AGCATCAGGT GGTTATCAAG
AGCCTGGAGG CCAATTACCG CCGGGTGCAA GGTATTTCCG GAGCAACCAT CATGGGGGAT
GGCCATGTGG CTCTTATTCT GGATGTGTCT GCGATCGCCG GAATGGCCAA GACAAGTATG
CACAAAGCCG CCTAA
 
Protein sequence
MAIDMSQFYQ VFFDESAEHL AAMEGLLLDL DIDNPDSEQL NAIFRAAHSI KGSAGTFGFT 
DLAETTHILE NLLDRIRKQE LGLRADMVDA FLECGDLLRG MLEAHQGRGE AVDPQSVASI
CARLRELSTD LPPDLAQGGG KALAEGVAAP SVDKRVFDIQ FVPTEISAKG DGVTNLLDEL
KSLGQLEILS QPDADIHSVG YWQVRLISDL GQEAFADQID FIAENGAWRV VEGKLSVGEP
DPAFGFFDDS PGTPDDDQGY GFFAPLDPSP IVENAAASEQ AGDDGYGFFE ALPATNVPEL
MPSVGADDEG DGYGFFAPLS AAEKTPEVLE EGDGFGFFVP VSPSAVSSVP ATQIPSLIAE
IDSPLPAVVP EKSPVESRAR AAKAAGPAVA AGESSIRVSI EKVDQLINLV GELVITQAML
LQTATQMQES APERLVNGLA QLERNTRDLQ ESVMSIRMMP ISFVFSRFPR VVRDLSGKLG
KQVELKTSGE TTELDKSLIE RIADPLTHLI RNSLDHGIEL PENRIAAGKS PIGTITLKAY
HQGGNIVIEV GDDGAGLPRN KILAKARERG FQVSDQMTDS EVFNLIFEAG FSTAEQVTDV
SGRGVGMDVV RRNIQSMGGR VEIESMLGVG TRMTVRLPLT LAILDGMSIA LGDQTYILPL
SYVIESFQPR MGDIKTLSNQ ARVIQVRGEY LPVVVLHELF NIKPSANDFT QGIMVVIDAD
GVKAALFVDA LVGQHQVVIK SLEANYRRVQ GISGATIMGD GHVALILDVS AIAGMAKTSM
HKAA