Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0713 |
Symbol | |
ID | 3569104 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 783587 |
End bp | 785014 |
Gene Length | 1428 bp |
Protein Length | 475 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637679162 |
Product | cbb3-type cytochrome c oxidase subunit I |
Protein accession | YP_283939 |
Protein GI | 71906352 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.000000000000329894 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.219559 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTGGAA CGCAAACCAC ATATAACGAT AAGGTCGTAC GGCAATTCGC CGTCATGACT GTCATCTGGG GCATCGTCGG CATGCTTGTC GGTGTCATCA TTGCAGCTCA ACTAGTCTGG CCGGAATTGA ATTTTGGTCC GTGGTTGCAC TTCGGGCGCC TGCGTCCGTT GCATACCAAC GCGGTTATTT TTGCGTTTGG TGGCTGTGCT TTGTTCGCAA CTTCTTACTG GTGTGTTCAG CGCACCAGCC ATGCCCGTCT TTGGGGTGGT CCGCTGGTTC CCTTTACCTT CTGGGGTTGG CAGCTTGTCA TTTTGGCTGC TGCAATCACG CTGCCTTTGG GTATGAGTCA GGGCAAGGAA TACGCAGAGC TGGAGTGGCC GATCGACATC CTGATCACGC TGGTCTGGGT TTCTTATGCG CTGGTCTTCT TCGGAACGAT CGCCAAGCGT ACGGTTTCTC ATATCTACGT AGCCAACTGG TTCTTCGGTG CTTTCATCAT CGCTGTCGCG CTGCTGCATC TGGTTAATAG TGCTGCCATG CCGATTACGC TGACCAAGTC CTATTCGGTC TATTCTGGCG TGCAGGATGC GATGATTCAG TGGTGGTATG GTCACAACGC CGTGGGCTTC TTCCTGACCG CTGGCTTCCT GGGCATGATG TACTACTTTG TGCCGAAGCA GGCTGGTCGT CCGGTTTACT CCTATCGCCT GTCTGTGGTC CACTTCTGGG CCCTGATCTT TACCTACATG TGGGCTGGTC CTCACCACCT GCACTACACC GCGCTGCCGG ATTGGACTCA GTCGGTCGGT ATGGTGTTCT CCCTGATTCT GCTGGCTCCG TCCTGGGGTG GCATGATCAA CGGCATCATG ACCCTGTCGG GTGCCTGGCA TAAGTTGCGC GACGACCCCA TCCTGAAGTT CCTGATCACT TCATTGTCTT TCTACGGTAT GTCTACCTTC GAAGGTCCGA TGATGTCGAT CAAGACTGTC AATGCGCTGT CGCACTACAC GGACTGGACC GTCGGTCACG TGCACTCCGG TGCTTTGGGC TGGGTGGCCA TGGTTTCCAT TGGTTCCATC TATTACCTGC TGCCGAAGCT TTTCGGCAAG ACCGAGATGT ACAGCACCAA GCTGGTCACA ACCCACTTCT GGATCGCTAC CATCGGTACC GTTCTGTATA TCGCCTCCAT GTGGATTGCC GGTGTGATGC AGGGCTTGAT GTGGCGTGCG GTTAATGCCG ACGGTACGCT GGCTTACAGC TTCGTCGAAT CCGTCAAGGG CTCCTACCCG TTCTGGGCGA TCCGTTGGCT GGGTGGTGTC CTGTTCCTGT CTGGCATGCT GATCATGGCT TTCAACATGT TCAAGACCAT GGCTGGCGGC AAGACTCAGG ATATGCCGGT GATCGCTCCG GCTGGTCATC ACGCCTGA
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Protein sequence | MSGTQTTYND KVVRQFAVMT VIWGIVGMLV GVIIAAQLVW PELNFGPWLH FGRLRPLHTN AVIFAFGGCA LFATSYWCVQ RTSHARLWGG PLVPFTFWGW QLVILAAAIT LPLGMSQGKE YAELEWPIDI LITLVWVSYA LVFFGTIAKR TVSHIYVANW FFGAFIIAVA LLHLVNSAAM PITLTKSYSV YSGVQDAMIQ WWYGHNAVGF FLTAGFLGMM YYFVPKQAGR PVYSYRLSVV HFWALIFTYM WAGPHHLHYT ALPDWTQSVG MVFSLILLAP SWGGMINGIM TLSGAWHKLR DDPILKFLIT SLSFYGMSTF EGPMMSIKTV NALSHYTDWT VGHVHSGALG WVAMVSIGSI YYLLPKLFGK TEMYSTKLVT THFWIATIGT VLYIASMWIA GVMQGLMWRA VNADGTLAYS FVESVKGSYP FWAIRWLGGV LFLSGMLIMA FNMFKTMAGG KTQDMPVIAP AGHHA
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