Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0642 |
Symbol | |
ID | 3568909 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 705060 |
End bp | 706427 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637679085 |
Product | signal recognition particle subunit FFH/SRP54 (srp54) |
Protein accession | YP_283869 |
Protein GI | 71906282 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
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Plasmid Coverage information |
Num covering plasmid clones | 53 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.821014 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTCGATA ACCTGACCAA CCGCCTTGCC CGCGTCATGA AGACGCTGAA GGGCGAAGCA CGCCTGACTG AAACCAACAT CGGCGATGCC TTGCGCGAAG TGCGTATGGC GCTGCTTGAG GCCGATGTGG CCTTGCCGGT GGTCAAGGAT TTTATTGCCG CCGTCAAGGA AAAGGCGGTC GGTGAAGAAG TGATCGGTTC GTTGAGCCCT GGGCAGGCCT TGATTGGTGT TGTGCATGCC GAACTGACCA AGATCATGGG TGATGCCCAT GAAGGCATCA ATTTCAATAC CCAGCCACCG GCTATTGTGC TGATGGCGGG TTTGCAAGGC GCCGGCAAAA CAACAACAGT CGGTAAGCTG GCCAAGTTCC TCAAGGAAAA TCACAAGAAG AAGGTGTTGG TCGTTTCCTG TGACGTTTAT CGTCCAGCCG CTATCGAGCA GCTGAAATCG GTTGCCGGTC AGGCTGGGGT TGATTTCTTC CCGTCGGCTG TTGGTGAGAA GCCGGAAGCG ATTGCCGCCG ACGCCATCGA TTGGGCCAAG CGCCATTACC ACGACGTATT GCTGGTCGAC ACGGCGGGCC GACTGGCCAT CGACGAAGAA ATGATGGCAG AAATCAAGCG CCTGCATGCG GCGATTGATC CAATTGAAAC GCTATTTGTG GTCGACGCGA TGCTTGGCCA GGATGCGGTG AATACCGCCA AGGCCTTCAA CGAGGCGCTG CCTCTGACCG GTGTCGTGCT GACTAAGCTG GATGGTGATG CACGCGGCGG TGCTGCATTG TCGGTACGTC ACATCACCGG CAAGCCAATC AAATTCGCCG GGGTTGGCGA AAAGCTGAGT GGCTTGGAGG CCTTTCATCC TGAGCGGATG GCGTCCCGTA TCCTGGGTAT GGGCGATGTG CTGTCGCTAA TCGAGGAGGC GCGCAAGGGG CTGGATGAGG AAAAGGCGGT TGCCTTCGCC AAGAAGTTGA AGTCAGGCAA GGGCTTTGAC CTCAATGATT TTAAGGAACA GATGGCCCAG ATGCGCAATA TGGGCGGGCT GTCGGCATTG ATGGACAAGA TGCCGGCTCA GATCGCCCAG GCGGCCGGGC AATTGCCCGC AGGGGCTGAG AATAAGATGA TTGGTCGGGT TGAAGGCATC ATCAATTCGA TGACGCCAGC CGAGCGCGCC AAGCCGGAGC TGATCAAGGC CAGCCGCAAG CGTCGTATTG CGATGGGGGC CGGGGTGCAG GTTCAGGAGG TTAACCGCCT GCTCAATCAG TTCGAAACGA CCCAGAAGAT GATGAAGCAA TTTTCCAAGG GCGGTATTGG CAAGCTGATG CGCGGCATGA AGGGCATGAT GCCCGGCATG GGCGGTATGG GACGCTGA
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Protein sequence | MLDNLTNRLA RVMKTLKGEA RLTETNIGDA LREVRMALLE ADVALPVVKD FIAAVKEKAV GEEVIGSLSP GQALIGVVHA ELTKIMGDAH EGINFNTQPP AIVLMAGLQG AGKTTTVGKL AKFLKENHKK KVLVVSCDVY RPAAIEQLKS VAGQAGVDFF PSAVGEKPEA IAADAIDWAK RHYHDVLLVD TAGRLAIDEE MMAEIKRLHA AIDPIETLFV VDAMLGQDAV NTAKAFNEAL PLTGVVLTKL DGDARGGAAL SVRHITGKPI KFAGVGEKLS GLEAFHPERM ASRILGMGDV LSLIEEARKG LDEEKAVAFA KKLKSGKGFD LNDFKEQMAQ MRNMGGLSAL MDKMPAQIAQ AAGQLPAGAE NKMIGRVEGI INSMTPAERA KPELIKASRK RRIAMGAGVQ VQEVNRLLNQ FETTQKMMKQ FSKGGIGKLM RGMKGMMPGM GGMGR
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