| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0638 |
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| Symbol | |
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| ID | 3568905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 699872 |
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| End bp | 701098 |
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| Gene Length | 1227 bp |
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| Protein Length | 408 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 637679081 |
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| Product | type II secretion system protein |
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| Protein accession | YP_283865 |
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| Protein GI | 71906278 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 0.00492015 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACCG CCGCAAGACG TAAGGCCTCG GCAGTCAAGG AAAGCACCTT CCTCTGGGAA
GGCAAGAACA AGGATGGCAA GACCGTTCGC GGGGAGATGC GCGTCGCAAG CGAGTCGGTC
GTCCAAACCA CCCTGCGCCG GCAAGGGATC ACCAATACAA AGGTAAAAAA AATCCGCTTC
AAAAGTGGCG GGAAAATTAC CGACAAAGAT ATCTCGCTGT TCACTCGACA ATTGGCGACC
ATGATGAAAT CAGGGGTGCC CTTACTGCAG TCATTCGACA TCGTTGGCCG CGGGCACTCG
AATCCGGCAG TCGGAAAACT GTTACTGGAC ATCAAGGCCG ATGTTGAGAC CGGGAGTTCA
CTATCCCAGG CCTTCCGCAA GTACCCACTG CAGTTCGACG CGCTCTACTG CAACCTGGTT
TCCGCTGGAG AACAAGCTGG TATCCTCGAT ACCCTGCTCG ACCGATTGGC CAGCTACAAG
GAAAAGATCC TGGCAATCAA GAGCAAGATC AAGTCAGCAC TGTTTTATCC TGTCGCTATT
CTCGTAGTCG CCTTCATCAT CACCGCGGTG ATCATGATCT TTGTCATTCC TGCCTTCAAG
GAAGTTTTCA AGGGCTTTGG CGCTGATCTC CCGGCTCCAA CCCTGATCGT CATTGCCATT
TCAGACTTTT TTGTCGCTTA TTGGTGGGCC ATTTTTGGGA TCATCGGCGG AGGACTCTAT
GCCTTCCTCG AGAGTTGGAA GCGATCCGAG AAAGTACAGA TGGCGATGGA CCGCCTTCTT
CTCCGCGTCC CCGTTTTCGG TGACATCGTG CGGAAATCAG TGATCGCCCG GTGGACCAGA
ACATTATCCA CGATGTTTGC GGCAGGTGTC CCGCTTGTCG AATCTCTCGA ATCCGTTGGT
GGGGCAGCAG GCAATCATGT CTATAAAGTT GCCACCCGGC AGATCCAGAG TGAAGTTTCT
TCCGGCACCA ACCTGACCAC CGCAATGCAG AATGTGAACC TTTTCCCTAA CATGGTCACG
CAGATGGTTG CTATTGGCGA AGAGTCTGGT GCACTGGATT CGATGCTCTC CAAGGTAGCC
GACTTTTTCG AGGCAGAAGT TGACGATGCA GTCGAAGCGA TGTCCAGCCT GATGGAACCA
ATCATCATGG TCGTGCTCGG CACCTTGATC GGCGGCATGG TCGTCGCCAT GTACCTGCCC
ATCTTCAAAC TGGGATCGGT GGTCTGA
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| Protein sequence | MATAARRKAS AVKESTFLWE GKNKDGKTVR GEMRVASESV VQTTLRRQGI TNTKVKKIRF
KSGGKITDKD ISLFTRQLAT MMKSGVPLLQ SFDIVGRGHS NPAVGKLLLD IKADVETGSS
LSQAFRKYPL QFDALYCNLV SAGEQAGILD TLLDRLASYK EKILAIKSKI KSALFYPVAI
LVVAFIITAV IMIFVIPAFK EVFKGFGADL PAPTLIVIAI SDFFVAYWWA IFGIIGGGLY
AFLESWKRSE KVQMAMDRLL LRVPVFGDIV RKSVIARWTR TLSTMFAAGV PLVESLESVG
GAAGNHVYKV ATRQIQSEVS SGTNLTTAMQ NVNLFPNMVT QMVAIGEESG ALDSMLSKVA
DFFEAEVDDA VEAMSSLMEP IIMVVLGTLI GGMVVAMYLP IFKLGSVV
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