Gene Daro_0613 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0613 
Symbol 
ID3568781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp681384 
End bp681842 
Gene Length459 bp 
Protein Length152 aa 
Translation table11 
GC content56% 
IMG OID637679056 
Productpreprotein translocase subunit SecB 
Protein accessionYP_283840 
Protein GI71906253 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1952] Preprotein translocase subunit SecB 
TIGRFAM ID[TIGR00809] protein-export chaperone SecB 


Plasmid Coverage information

Num covering plasmid clones70 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAACAAA ACGAACAGCC CGTTTTTGGT ATTGAAAAGC TCTACGTCAA GGATCTGTCG 
GTCGAAGTGC CGAATGCGCC GGAGATTTTC CTTGAGCGCG AGCAGCCGCA GGTTGAGATT
CAGCTCAATA CGGGTGGCCG TGCGGTTGGT GATGGCGTGT ATGAAGTGGT GCTGACCGTG
ACGGTTACCG CCAAGATGCC TGAAAAAACA GTGTTCCTGG TCGAGGTCGG CCAAGCCGGC
ATATTCCGTA TCCAGAACGT TCCGGAAGAG CAACTGGAGC CGCTGATCGC CGTTGCCTGC
CCGAACATTC TGTTCCCTTA CGCTCGCGAA GCCGTTTCCG ATGCGGTCAG CCGTGCTGGT
TTCCAGCCGA TCGTGCTGCA ACCGGTTAAC TTTGAAGGCA TGTACATGCA GCGCCTGCAG
GAACAGGCTG GCGCTCCGGC CGAAGTGCCG ATTCAATAA
 
Protein sequence
MEQNEQPVFG IEKLYVKDLS VEVPNAPEIF LEREQPQVEI QLNTGGRAVG DGVYEVVLTV 
TVTAKMPEKT VFLVEVGQAG IFRIQNVPEE QLEPLIAVAC PNILFPYARE AVSDAVSRAG
FQPIVLQPVN FEGMYMQRLQ EQAGAPAEVP IQ