Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0603 |
Symbol | glyA |
ID | 3568771 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 673202 |
End bp | 674452 |
Gene Length | 1251 bp |
Protein Length | 416 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 637679046 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_283830 |
Protein GI | 71906243 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTTTCCG CGAAAGACAC CCTGGCAAAA GTTGACCCTG AACTCTGGCA GGCCATTCAG GCCGAAGTAC AGCGTCAGGA AGACCACATC GAACTGATCG CGTCCGAAAA CTACGTGAGC AAGGCTGTCA TGGAAGCCCA AGGCTCCCAG CTGACCAACA AGTACGCCGA AGGCTACCCG GGTAAGCGCT ACTACGGTGG CTGCGAATAC GTTGACGTCG CCGAGCAGAT CGCCATCGAC CGCCTGAAGA AGCTGTTCGG CGCCGAAGCC GCCAACGTCC AGCCGAATTC CGGTTCGCAG GCCAACCAGG CCGTGCTGAT GGCCTTCGCC AAGCCAGGCG ACACCATCAT GGGCATGAGC CTGGCCGAAG GCGGCCACCT GACCCACGGC ATGGCGCTGA ACATGTCCGG CAAGTGGTTC AACGTCGTCT CCTACGGCCT GAATGAAAAG GAAGAGATCG ACTACGACAA GATGGAAGCG CTGGCCCGCG AGCACAAGCC GAAGATCATC GTCGCCGGTG CCTCCGCCTA CGCCCTGCGC ATCGACTGGG AACGCTTCGC CAAGATCGCC AAGGAAGTCG GCGCCATTTT CTGGGTCGAC ATGGCCCACT ACGCCGGTCT GATCGCCGCC GGATTCTACC CGAACCCGGT GCCTTTCGCC GATGTCGTGA CCTCGACCAC GCACAAGACC CTGCGCGGCC CACGCGGTGG TGTCATCCTG ATGAAGGCCG AGCACGAAAA GGCCCTCAAT TCCGCCATCT TCCCGGGCCT GCAAGGCGGT CCGCTGGAGC ATGTGATCGC CGCCAAGGCC GTCGCCTTCA AGGAAGCCGC GACGCCCGAG TTCAAGAACT ACCAGGAACA GGTCATCAAC AACGCCCGCG TCATGGCGCG CGTGCTCGGT GAAGAGCGCG GTCTGCGCAT CGTTTCTGGC CGTACCGAAA GCCACGTCTT CCTGCTCGAC CTGCGCGCCA AGAACATCAC CGGCAAGGAT GCCGAAGCCG CTCTGGGCCG CGCCCACATC ACGGTCAACA AAAACGGCAT CCCGAACGAC CCGCAGAAGC CGTTTGTTAC CTCCGGCATC CGTATCGGTT CGCCGGCCAT GACGACGCGC GGTTTCACCG AAATCGAAGC CGAGCAGATC GCTCATCTGG TTGCTGATGT GCTGGAAGCA CCGAGCGACG AAGCCGTGGC CGCAACTGTT CGCGAGAAAG TTTCGGCCCT GTGCAAGAAG TTCCCGGTCT ACGGCGCCTA A
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Protein sequence | MFSAKDTLAK VDPELWQAIQ AEVQRQEDHI ELIASENYVS KAVMEAQGSQ LTNKYAEGYP GKRYYGGCEY VDVAEQIAID RLKKLFGAEA ANVQPNSGSQ ANQAVLMAFA KPGDTIMGMS LAEGGHLTHG MALNMSGKWF NVVSYGLNEK EEIDYDKMEA LAREHKPKII VAGASAYALR IDWERFAKIA KEVGAIFWVD MAHYAGLIAA GFYPNPVPFA DVVTSTTHKT LRGPRGGVIL MKAEHEKALN SAIFPGLQGG PLEHVIAAKA VAFKEAATPE FKNYQEQVIN NARVMARVLG EERGLRIVSG RTESHVFLLD LRAKNITGKD AEAALGRAHI TVNKNGIPND PQKPFVTSGI RIGSPAMTTR GFTEIEAEQI AHLVADVLEA PSDEAVAATV REKVSALCKK FPVYGA
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