Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0482 |
Symbol | |
ID | 3570206 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 544619 |
End bp | 545842 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637678924 |
Product | major facilitator transporter |
Protein accession | YP_283709 |
Protein GI | 71906122 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 64 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCAACATA ACCAGACCAT AATGTCCGCC CCCACTGATC GCATGAGCCC CGAGGAACGC CGCGCCGGCG CCTCGCTGGC CTCCATCTTC GCCCTGCGCA TGCTCGGCCT GTTCCTGATC CTGCCTGTGT TTTCGGTCTA CGCGAAAACC CTGCCCGGGG GCGACAACCT GGCCCTGGTT GGTTTTGCGC TCGGCGCCTA TGGCCTGACC CAGGCCTTTT TCCAGATTCC CTACGGCATC GCCTCGGACA TCTTCGGGCG CAAACTGGTC ATCGTCGTCG GCCTGCTGAT TTTTGCGCTG GGCAGCTTCG TCGCCGCCTG GGCGCCGGAC ATGAACTGGA TCATCGTTGG CCGCGTGCTG CAGGGCGCCG GGGCAATTTC GGCAGCGGTC ACCGCGCTGG CTGCCGACCT GACGCGCGAG GAACATCGAA CCAAGGTGAT GGCGATGATC GGCTCGTCGA TTGGCCTGGT CTTCGCCCTG TCGCTGGTCG GCGCGCCGAT TCTCTATGGC TGGATCGGCA TGTCCGGGCT GTTCATCATG ACCGGTGTGC TCGCCCTGTC CGCCATCGTC CTGCTGATCA AGGCCGTGCC ACCGGCCCCG GCACCGCAAG GCCATGAAAA ACTGCCCTTG CGCCGGGTGA TTTTCGATCC CGATCTGCTG CGCCTGAATC TCGGCATCTT CACGCTGCAC ATGGTGCAGA TGGCCATGTT CGTCGTACTG CCACACGCCC TGGTCAATCA TGGTGGCCTG GAAGCCGCGT CGCACTGGAA GGTCTATCTG CCCGCCGTGC TGGTTTCTTT TGCCATCATG GTGCCGGCCA TCATCGCGGC CGAGCGCAAG GACAAGATGC GCCCCATCTT CATCGCCGCC GTTGGCCTGC TCGTCGTTGT CCAGGCCGGC CTGTTCGTAT TGCACGAAAG CCTTTGGGCG CTGGCCTTGT GGCTGTTGCT TTTCTTCGTC GCCTTCAATG TGCTGGAAGC GACGCTGCCG TCGCTGGTCT CGCGCACTGC CCCGCCGGCC GCCAAGGGCG CGGCGCTGGG CGTCTACAAC ACGACACAGG CCATCGGTCT GTTCATTGGT GGTGCAGCGG GCGGATATAT TGCGCAGCAT TTCGGCGATA ATGCGGTTTT CGCCGCTTGC ACAGGTCTGG TTCTGATCTG GCTGGTGGTC GCAAATTCCA TGAATTTTCC GCAACGGCGC CCGGTCGCCG CGGCGACACG ATAG
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Protein sequence | MQHNQTIMSA PTDRMSPEER RAGASLASIF ALRMLGLFLI LPVFSVYAKT LPGGDNLALV GFALGAYGLT QAFFQIPYGI ASDIFGRKLV IVVGLLIFAL GSFVAAWAPD MNWIIVGRVL QGAGAISAAV TALAADLTRE EHRTKVMAMI GSSIGLVFAL SLVGAPILYG WIGMSGLFIM TGVLALSAIV LLIKAVPPAP APQGHEKLPL RRVIFDPDLL RLNLGIFTLH MVQMAMFVVL PHALVNHGGL EAASHWKVYL PAVLVSFAIM VPAIIAAERK DKMRPIFIAA VGLLVVVQAG LFVLHESLWA LALWLLLFFV AFNVLEATLP SLVSRTAPPA AKGAALGVYN TTQAIGLFIG GAAGGYIAQH FGDNAVFAAC TGLVLIWLVV ANSMNFPQRR PVAAATR
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