| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0468 |
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| Symbol | |
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| ID | 3569133 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 523503 |
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| End bp | 526907 |
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| Gene Length | 3405 bp |
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| Protein Length | 1134 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 637678910 |
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| Product | UvrD/REP helicase |
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| Protein accession | YP_283695 |
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| Protein GI | 71906108 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1074] ATP-dependent exoDNAse (exonuclease V) beta subunit (contains helicase and exonuclease domains) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGTGCTTG CCATCGATCG CCTTGAAGAA GACAGGATTG CCCGGCAGCG GGCGCTGGAG
GTTGCCTCCT TCATCGTCGA GGCACCGGCC GGCGCCGGCA AGACGGAATT GCTGACGCAG
CGTTACCTGC GCCTGCTGGC CGTGGTCGAG CACCCAGAAG AGGTGTTGGC GCTGACCTTT
ACCAACAAGG CAGCCACCGA GATGCGCGAC CGCATCCTCG GCAGCCTGGA ACTGGCGTCC
GGCGACAAAC TGCCGGAACA GCCGCACAAG CAGCTGACCT TCGGGCTGGC CAGGCAGGTG
CTGGCGCATG ACGCCGAGCG CGGCTGGAGT TTGCTCGGCC ATCCCGGCCG GCTGCGCATC
ACGACCCTGG ATTCCCTCTG TGCAAGTCTG GCCCGCCAGA TGCCCTACCT GAGCCGCTTC
GGCAGCCAGC CGGGCGTCAG CGACGATGCC GAGGCGCACT ACGCGACGGC AGCGCGGCGG
ACACTGGAAA TGGTCGAGTC CGGGAGCGAC GATGCCGAGG TGATCGCCGA GGCGCTGGCT
TTCATGGATA ACAACGCCGG CCGCCTGGAA AAATTGCTGA TAGCCATGCT TGGCCGTCGC
GACCAGTGGC TGCACCACGC CTCGCGCATC GAAAGCGGGG CGATGAAGCG CGAAGTCGAA
GCCGGCTTTG CAGCGCTGAT CGAGCGCGAT CTGGCCGCGG TCGGCGGCTT GCTCGACGGG
CGGATGCAAT CGCTGCTGAT GCCCTTGGCC CGCTTTGCGG CGGCCAATGC GCCGGGCCTG
CTCGATGCCA TTGCCGACTG GAGCTCGCCG CTGACTGCGG CGATTGCCGA TCTGCCAACT
TGGCAAGCGC TGGCCGGACT GCTGCTGACT GGCACCGGCA CACTACGCAA GTCGGTCGAC
AAGCGCATCG GTTTTCCGGC TGACAAGGAA TTGGCCGACC AGAAGAAAGC CATGCTCGAA
TTGCTCGGCG ATCTGCGCAG CGTGGATGGG CTGGAAGCGG CGCTGGCCAT GCTGGTCAAA
TTGCCGCAGC CGGAACTGAG CGAGGCCGAG TGGGCCACCG TCGAATGCTT CTCGCGCCTG
CTCCGGCTGG CGGCCGGTCA ATTGTGGCTG GCCTTCCAGG AAGCCGGCGA GGTCGATTTC
ATCGAGATCG CCGCCCGGGC CGGGCTGGCG CTGGGCGATG ACGATGCGCC GACCGATCTG
GCGCAGGCGC TCGATTACCG GATTCGCCAT CTGCTGGTCG ATGAATTCCA GGACACCAGC
CCGAGCCAGG TCGGCCTGAT CGAAAAACTG ACGCGTGGCT GGATGCCGGA CGACGGCCGG
ACACTGTTTG TGGTCGGCGA CCCGATGCAG TCGATCTACC GTTTCCGCAA GGCCGACGTC
GGGCTGTTCC TGCGCGTTCG CGAGCGTGGC ATCGGCGATA TCCGGCTTGG CCATCTGCGG
CTGTTCCGCA ACAACCGCTC CTACCCGGGC ATTGTCGATT GGGTCAATGC CGCCTTCCCG
AGCATCTTCC CGGCCGAGGA CAGCCCGGAG GCCGGCGCGG TGCGCTATGC CGAATCGGCG
GCGACCCGTT CGCCGCGTGC CGATAGCGGC GTCGTCGTGC ATCCGGTCAT CGAGCACGAA
GGGGGGGACG CCGCCGGTGA GGAGGCTCGC CGGGTCCTCA CCATCATCCG GGAAGCCCGC
CGCGCCGCGC CAGCCGAACG CATCGCCGTG CTGGTTCGCG CCCGCAGCCA CCTCGATGCG
CTGGTCAGCG AGATCCGGCG CAGCGCGCCC GAACTGCGTT TCCAAGCGGT CGATATCGAA
GGCCTGGATG GCCGCCAGCA TGTGCAGGAT TTGCTGACCC TGTTCCGTGC CCTGCATCAC
CGCGCCGACC GCGTCCACTG GCTGGCCCTG CTGCGCGCTC CGTGGTGTGG CCTGAAACTG
GCCGATCTGC ATGCGCTGGC CGCCGACGAC AAGAAATCGA CGATCTGGCA ACTGATGCAG
GATGAGGCCC GCCTCGCCCG GCTATCCGAT GACGGCCAGC AACGATTGAG ACATGTGCTT
GGCGTGCTGC ACCAGGCCTT CGCCGGCCGC GACCGCCAGC ACCCGCGGCG CTGGCTGGAA
GGTGTCTGGC TGATGCTGGG CGGACCACGT TGCCTGGAAG CGCCGGAAGC CCTGAACGAT
GTCGAAGCCT TCTTCGCGCT GGTCGACAAG CTGGTCGCCA GCCGTACGCT GAGCGCCGAA
ACCCTGGCTG CCCATGCCGC CGAACTCTAT GCGCCGTCCG ACCCGCTGGG TGATGCCGTG
CAGATGATGA CGGTGCATAA ATCCAAAGGC CTCGAATTCG ATACGGTGAT CCTGCCCGGC
CTGCACCGCG AAACCGGTGG CAACGACAGC AGCCTGCTGC TCTGGGATGA GGTCGCCGGG
GCCGATGGCG ATGAACACCT GCTGGTCGCG CCAATCAAGC AGAAAGGCGC CGGCAATGGT
GAGCCAACCG CCTACGACTA CCTTAAAAAG CTCGAAGCCG AGCGGGCCGC GCACGAAGAT
GAGCGACTGC TCTACGTCGC GGCCACCCGC GCCATCCGCC GCTTGCATCT GCTCGGCATC
GCCGTGGCCG ATGCAAAGAA GGAGGAGGGG CTGAAGTCGC CGGCCAATGG CACGCTGCTC
AAGCTGTTGT GGCCGGGTGT GGCGCAGCGC GAATTTTTGG CGGCGCTGAC TGAGGGCGAG
TCTGGCGAAC CCGCTCGTGC CAGCATCGAC CCGGCGACTT TCGTGCCACC GCTGGTTCGC
CTCCGGGAGG TGCATGTGCC GCCGGCCTTG CGGTCGCCGG CCGAAGGCGT CCGTCCGGCA
GATAACCCAG TCGATCTCGA TACGCCGGAA AGTACCCTGT CGCTGGAGGC CTCGGTCGGT
ACCCTGGTGC ACCGCTGCCT GGAGCTGATC GCAAAAAATG GCTTGCCAGC CTGGTCAGAC
AAACGGATTT CCGGTTTGCA ACCGGTATAC CAACGCTGGT TGCAGGCGCA AGGGCACAGC
GAGGCCGACG CCGAAAGTGG TGCTGGCGAA GTGGTCGCCG CCCTGGTCAG TACATTGGCG
TCCGATACCG GGCGCTGGTT GCTCACCGAT CACCCGCAAT CTGCCGCCGA GCAGGCCTGG
AGCAGCACGG ATGGCTCGCT CACGGTCAAT CACGTGATCG ACCGTGTTTT CGTGGCCGAT
GCCTGCCGCT GGATCATTGA TTACAAGACG GTACGCTTGC CTGACGCGGA ATTGCCGCAG
AGAGCCGAAA GCTACCGGCC GCAGCTCGAA CGCTATGCCA GCCTGTTTGC TGGCGATCCG
CTGCCCTTGC GCCTGGCCAT CTATTTTCCG TTGCAGGGGC GCCTGATCGA GTTGCCAGCG
GCCATGCCTT CGGCCCGCGC TGCCCAGTTC AGCCTGTTTG AATAA
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| Protein sequence | MVLAIDRLEE DRIARQRALE VASFIVEAPA GAGKTELLTQ RYLRLLAVVE HPEEVLALTF
TNKAATEMRD RILGSLELAS GDKLPEQPHK QLTFGLARQV LAHDAERGWS LLGHPGRLRI
TTLDSLCASL ARQMPYLSRF GSQPGVSDDA EAHYATAARR TLEMVESGSD DAEVIAEALA
FMDNNAGRLE KLLIAMLGRR DQWLHHASRI ESGAMKREVE AGFAALIERD LAAVGGLLDG
RMQSLLMPLA RFAAANAPGL LDAIADWSSP LTAAIADLPT WQALAGLLLT GTGTLRKSVD
KRIGFPADKE LADQKKAMLE LLGDLRSVDG LEAALAMLVK LPQPELSEAE WATVECFSRL
LRLAAGQLWL AFQEAGEVDF IEIAARAGLA LGDDDAPTDL AQALDYRIRH LLVDEFQDTS
PSQVGLIEKL TRGWMPDDGR TLFVVGDPMQ SIYRFRKADV GLFLRVRERG IGDIRLGHLR
LFRNNRSYPG IVDWVNAAFP SIFPAEDSPE AGAVRYAESA ATRSPRADSG VVVHPVIEHE
GGDAAGEEAR RVLTIIREAR RAAPAERIAV LVRARSHLDA LVSEIRRSAP ELRFQAVDIE
GLDGRQHVQD LLTLFRALHH RADRVHWLAL LRAPWCGLKL ADLHALAADD KKSTIWQLMQ
DEARLARLSD DGQQRLRHVL GVLHQAFAGR DRQHPRRWLE GVWLMLGGPR CLEAPEALND
VEAFFALVDK LVASRTLSAE TLAAHAAELY APSDPLGDAV QMMTVHKSKG LEFDTVILPG
LHRETGGNDS SLLLWDEVAG ADGDEHLLVA PIKQKGAGNG EPTAYDYLKK LEAERAAHED
ERLLYVAATR AIRRLHLLGI AVADAKKEEG LKSPANGTLL KLLWPGVAQR EFLAALTEGE
SGEPARASID PATFVPPLVR LREVHVPPAL RSPAEGVRPA DNPVDLDTPE STLSLEASVG
TLVHRCLELI AKNGLPAWSD KRISGLQPVY QRWLQAQGHS EADAESGAGE VVAALVSTLA
SDTGRWLLTD HPQSAAEQAW SSTDGSLTVN HVIDRVFVAD ACRWIIDYKT VRLPDAELPQ
RAESYRPQLE RYASLFAGDP LPLRLAIYFP LQGRLIELPA AMPSARAAQF SLFE
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