| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0449 |
|---|
| Symbol | |
|---|
| ID | 3568361 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 493190 |
|---|
| End bp | 493690 |
|---|
| Gene Length | 501 bp |
|---|
| Protein Length | 166 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 637678890 |
|---|
| Product | 1-(5-phosphoribosyl)-5-amino-4-imidazole- carboxylate (AIR) carboxylase |
|---|
| Protein accession | YP_283676 |
|---|
| Protein GI | 71906089 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0041] Phosphoribosylcarboxyaminoimidazole (NCAIR) mutase |
|---|
| TIGRFAM ID | [TIGR01162] phosphoribosylaminoimidazole carboxylase, PurE protein |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 60 |
|---|
| Plasmid unclonability p-value | 0.88623 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.724767 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGCCG TGCAACAACC CGTCGTCGGT ATCGTCATGG GTTCCGATTC CGACTGGCCG
ACCATGCAGG CCGCCGCCGT CATCCTCAAG GATTTCGGCG TGCCCTTCGA GGCCCGTGTC
GTTTCCGCTC ACCGCACCCC GGATCTGCTA TTCGATTACG CCGCCATGGC TGGCGAGCGT
GGCCTCAAGG CAATCATTGC CGGGGCCGGC GGTGCCGCCC ACCTGCCGGG CATGCTGGCC
GCCAAGACCA TCGTGCCGGT GCTCGGCGTG CCGGTGCAAT CGAAAGCCCT GTCCGGTGTC
GATTCGCTGC ATTCCATCGT CCAGATGCCG AAGGGTATTC CCGTCGCCAC CTTCGCCATC
GGTGAAGCCG GTGCCGCCAA TGCAGCACTG TTTGCCGTTG CCATGCTGGC CAACGAGAAC
CCGGCGTTGA ATGCCAAGCT GCAGGCCTTC CGCCAGGCTC AGACCGAAAA GGTCCTGGCC
ATGAAACTCC CCGGGGTTTA A
|
|---|
| Protein sequence | MNAVQQPVVG IVMGSDSDWP TMQAAAVILK DFGVPFEARV VSAHRTPDLL FDYAAMAGER
GLKAIIAGAG GAAHLPGMLA AKTIVPVLGV PVQSKALSGV DSLHSIVQMP KGIPVATFAI
GEAGAANAAL FAVAMLANEN PALNAKLQAF RQAQTEKVLA MKLPGV
|
|---|
| |