| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0423 |
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| Symbol | |
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| ID | 3567669 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 464432 |
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| End bp | 465871 |
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| Gene Length | 1440 bp |
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| Protein Length | 479 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 637678863 |
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| Product | D-alanyl-D-alanine carboxypeptidase PBP3 |
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| Protein accession | YP_283650 |
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| Protein GI | 71906063 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG2027] D-alanyl-D-alanine carboxypeptidase (penicillin-binding protein 4) |
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| TIGRFAM ID | [TIGR00666] D-alanyl-D-alanine carboxypeptidase, serine-type, PBP4 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 34 |
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| Plasmid unclonability p-value | 0.0149677 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.00364123 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTTCATCA AGAGACTCGC CCCCCTGATC CTGGCCGGGA TTTCCCTGGC TGCGCTGGCC
GACGGCCTGC CCCCCAGCGT ACTTGGCGCG CTGAAGGCGG CGCAAATTCC CGCAAAAAAT
GTCGCAGTCG TCATCCAGGC GGTCGATAGC GGATCGCCAC TGGTCGCCCA CAACGCAAGC
CAGGCGATGA ACCCGGCGTC GGTGATGAAA CTGGTCACCA CCTATGCCGC CCTTGATCTG
CTTGGCCCGG CCTACACCTG GAAAACCACG GTGTGGACTG AAAGCGCGCC GGTTGATGGC
ATTTTGAGCG GCAATCTGTA TATCAAGGGC AGCGGTGACC CGCGCTTCGC CATCGAACAC
CTGTGGTCCC TACTCCGCCA GTTGCAGGTC CGTGGCATCC GGCAGATTGC CGGCGATGTC
GTGCTGGACC GCACGGCCTT CAACGTACCG AGCATCGACC CCGGCGCCTT CGATGACAAG
CCAATGCGCC CTTACAACGT CGGCCCGGAT GGTCTGCTGC TCAATTTCCG ATCCCTGCGC
TTCACGCTAG TGCCGGACAA CGGGAAGCCG CGCGTGCTGA TGGAAACGCC GAGTGAAGGC
CTGCGCGTCG ACAACCAGTT ACGCGCCGGC AACGGCGACT GCGGCAGCAA CTGGAAGGAC
TTGATCAATG TTCGCCTGAT TCCGGAAAAC AGCGGCAACC GGCTGGAATT CACCGGCACT
TATTCGGCAC TATGCGGCGA GAAACCCCTG AACCTGTCGC CGCTGCCGGC TGACGCCCAG
GCCGACGGAT TGATCCGCGC CCTGTGGAAG GAACTCGGCG GCAACCTGAA TGGCCAGGTT
CGCGGCGGCA CCGTACCGAT AGGCGCCAAG CTGCTGGCTC AGCACGAGTC GGCCCCGTTG
GCCGACGCGG TGCGCGACAT CAACAAGTTC AGCAACAACG TGATGGCGAG GCAGGTTTTC
CTCACTTTAG GCAATGATTC AGCACCAGCC ACGGCCGAAC GCTCGAAGCA ACGAATCAGC
GACTGGCTGG CCGCCCGCAA CCTGCGTTTC GGCGAACTGG TGCTCGACAA CGGTTCCGGC
CTGTCACGCG TCGAACGGAT CAGTGCCGAC AGCCTGAACC GCCTGTTGCT CGACGCCTGG
AAGAATCCGG TGATGCCGGA GTTCGTGTCC AGCATGCCCA TCGTCGGCAT CGACGGCACG
ATGAAGAAGC GCCTGAATAG CTCCGAGGCG ACCGGCCGCG CCCATATCAA GACCGGCACG
CTGGATGGCG TCAAGGCGGC ATCGGGCTAC GCGCTGGATG CGCTGGGGCG CCGCTACGCC
TTCACCTTCC TGATCAACCA CCCGAAGGCC CAGGCTGGCA GCGCGGCCAT CGACGCCCTG
CTCGTCTGGG TGGCCCAGCG CCGGGTTGGC GAGAAAACAC CGGTGCTGGA AAATGAGTGA
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| Protein sequence | MFIKRLAPLI LAGISLAALA DGLPPSVLGA LKAAQIPAKN VAVVIQAVDS GSPLVAHNAS
QAMNPASVMK LVTTYAALDL LGPAYTWKTT VWTESAPVDG ILSGNLYIKG SGDPRFAIEH
LWSLLRQLQV RGIRQIAGDV VLDRTAFNVP SIDPGAFDDK PMRPYNVGPD GLLLNFRSLR
FTLVPDNGKP RVLMETPSEG LRVDNQLRAG NGDCGSNWKD LINVRLIPEN SGNRLEFTGT
YSALCGEKPL NLSPLPADAQ ADGLIRALWK ELGGNLNGQV RGGTVPIGAK LLAQHESAPL
ADAVRDINKF SNNVMARQVF LTLGNDSAPA TAERSKQRIS DWLAARNLRF GELVLDNGSG
LSRVERISAD SLNRLLLDAW KNPVMPEFVS SMPIVGIDGT MKKRLNSSEA TGRAHIKTGT
LDGVKAASGY ALDALGRRYA FTFLINHPKA QAGSAAIDAL LVWVAQRRVG EKTPVLENE
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