Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0389 |
Symbol | |
ID | 3569860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 420106 |
End bp | 425289 |
Gene Length | 5184 bp |
Protein Length | 1727 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 637678831 |
Product | Alpha-2-macroglobulin, N-terminal:Alpha-2-macroglobulin, N-terminal 2 |
Protein accession | YP_283618 |
Protein GI | 71906031 |
COG category | [R] General function prediction only |
COG ID | [COG2373] Large extracellular alpha-helical protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.188526 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.0474076 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGGTT TGTCGAAGAG TCGGGGTTTC GGGGCTGTTG CCTGGTTGGT GGCGCTGGCG GTTGCGATCG CTGCTGTCCT GATCTACGCC AAGCCATGGC AATCGGAAAC GGCGAGCGCC GGAGACGGGC CGTTCGAGAT TGCCGATTTC TCGAATCGCG ATTTCGAAGG ATCGCCATCG CTCGCGTTGA GTTTTACCCT GCCGATGGAT GCCAAGAAGG GCTACGATGA GCAGATTCAG GTCTTCGAGA TGCCGCCGCG CCCGGGCGAT GCCAAGGCGC AGGTGAATGA ATCCGAGGAT GAAGGCGAGG AGGGCGCGCC GGGCAGCGCC AATCCGCAAG TCAGCACCGA GCCGGCCGAT GTCGCGACCG ACGGTGGCAA GCTGATCAAG GGCGCCTGGG TGGTCGGCGA CAATCCGCGC ATCCTGTATT TTCCGCACAT CAAGCCGCAG ACGCGCTATG TCGTTCGCGT CGCTGCCGGC CTGAGTTCGC TGTCCGGTCA GAAGCTGAAT GAGGAGGGGC GTTACTCGGT GGTTACGGCC ACTGTGGCGC CCGCCTATTA CTTCGCCAGT CGCGGCACGG TCCTGCCGGC CAAACAGAAT GGCGGTTTGC CGGTAGTCAC CGTCAACGTG CCTGAGGTCG ATGTCCAGTT CCTGCGCGTC AAGCCGGACC AGCTGCCGCG CTTCCTCGAC AAGGTGATCA GCGGGCCGCG GCCGCAGGCG CGCGCCAAGC GCCAGAACAA CGACGACTAC GACTATGACG TGGAGTACGA CGGCGACTAT GACTGGCGCG CCACCAGCCT GAAGGGGGCG GTCAACAACT GGTCGCTGGA CAGCTTGCAC AACCTGACCG AAAGCGTCTT TGTCGGTCGT TTCCTGACCG AGCAGAAGCC CAACAAGCGC AACGTCACTT TCCTGCCGGT CGAGGACATC AAGGAACTCC GCGAACCGGG GATCTATATC GCGGTGATGA GCCAGCCCAA CCGCTTCCGC TACGACTATC AGGTGACCTA TTTCTACGTC AGCGATCTCG GCCTGAGCAC CCGCCTGTTT GCCAAGGGGG CTGATGCCTA TGTCAGTTCG CTGACCACAG GCAAGGCTGT TTCCGGTGTT GAAGTAGCGT GGATGGACGA AAACGCCAAG GTGGTGGGTC GCGCCGAAAC CGACAGCAGC GGCCGCGCCA ACTTTGCCGA GCGGCCCGCT GCAGCGAAGG TCATCATTGC TCGTCACGGC CAGCAGATCT CGATGGTCAC GCTCAAGGAA CCGGCGCTCG ACCTGTCCGA ATACGATGTG GCCGGCCTGC CCGGTCGGCC GGTGCGCCTG TTCGCCTACT CCGGGCGCAA CCTGTATCGC CCCGGCGAGA AATTCGACAT TTCCGTGCTC GCGCGTGATG CCGATGGGCG ACCGGTGCCG GCCCAGCCGA TTCAGGCCAT CCTCCGGCGT CCGGACGGCA AGAGCCAGTT CACCGCGACC TGGCAGCCGG ATGCCAAGCT CGGTGGCTAC TACCAGAGTC GCATCGAGCT GCCGGTCGAC GCCGCAACCG GTGCGTGGAC CCTCGAGCTG CGCGCCGACC CAGCCGACAA GCTGGCGACC ACCAGCTTCC GTTTCGGGGT CGAGGAATTC CTGCCCGAAC GCATGAAGCT CGACCTGAAC AGCAAGCAGG CGACGGTCTC GCCCGACGAA TCCCTGAAAA TCGACATCAA GGGCGCCTAT CTCTACGGAG CCCCGGCGGC TGGCAACCAG CTGCTCGGCG TGGCCGTTTT CGAGCGCCAG AAGAATCCGC TGGCGCAAAA GCTGCCCGGC TTCGAGTTCG GCGATACCAA TGAGGACAGC CAGCGTCAGC GCGTTGAACT CGAGCAGAAC CAGCTCGACG AGAACGGCGA CCTCGCGCTG GAGGTCGATC TCGCCCCGGC CAAGGGCAAG CGTTCGCCCT ACACGGTACG GACAACGCTC AGCCTGCTCG AAAGCGGCGG CCGGCCGGTG GTGCGCAATT TTGAACGGGT GATCTGGCCA GCCCCGGTGC TGGTCGGTGT CCGTCCTCTG TTCACCGGCG ATTACGCCCG CGAAGGCAGC GTCGCCCAGT TCGAGGTGAT CCGCGCCAAC GCCGAAGCCA AGCTGCATGG CGGCAAGGCA CTGCCTGTCC GCCTGTTCCG CGAAAACCGC GACTACTACT GGCGCTTCGA TGACCAGCGC GGCTGGCATT CGGGCTTCAC CGAAACCGAC GAGCTGGTCG ACACGACGGT GGTCAGCATT CCCGATGGCA GCCGCGGCAA GCTCGGCCTG CCGGTCAAAT ACGGCCGTTA TCGCGTCGAG ATCACCGATT CGGAAACCGG CCAGATCACC AAATACCGCT TCTACGCCGG CTGGAGTGCA CGCGGCGACG AAACGCAAGG CGTCCGTCCC GACCGGGTGG CGCTGAAGTT CGACAAGCCG GCCTACAAGG ATGGCGAGAC TGCCAAGCTG ACCATCACCC CGCCGCATGC CGGCGAAGCG CTGGTCACCG TTGAGGCCGA CAAGACCCTT TGGTTGAAGC GCGTTTCGGT GCCGCTCGAA GGCACGACCA TTGATATCCC GGTCGACAAG GACTGGAAGC GTCACGACCT CTACGTCTCG GCCGTGGTGC TGCGCCCGGG CAGTGCCGGT GAAAAGGTCA CTCCGGCGCG GGCGCTCGGC CTGACCCATC TGCCGCTCGA ACGTGGCGAC CGCAAGCTGG CAGTCAGCCT CGATGCACCG AAGAAGATGT TGCCGGACAC CCGCCTCAAG GTGAAGGTGA AAGTTCCCGG CCTGACCGGG CAGCAGGCAG TTGTTACGCT CTCGGCAGTC GATGTCGGCA TCCTCAACAT CACCCGTTAC GCCACGCCTG ATCCGCATGG CCATTTCTTT GGGAAGCTGC GCTATGGCGC CGACCAGTAC GACGTCTATG GTCGCCTGAT CGAGAAGATG GGCGGCCAGA AGGGTAAGCT GAAGTTCGGT GGCGATGCGG CGCCGAAGGC GACCAAGAGC CTGCCCAAGA AGGTGCGTCT GGTCGATCTG TTCTCCGGGC CGGTGCAGCT GAACGAGCAG GGCGAAGCCG AAATCGGCCT CGACGTGCCA GACTTCAACG GCACCCTGCG CCTGATGGCG GTGGTTGCCG CACCGGACAA GTTCGGTAGC GCCGAGGCGG AAACCATCGT CGCCGCACCG CTGGTCGCCG AACTGATGAC GCCGCGCTTC CTGACCGTGG GCGACAACGC GACCATCGCG CTCGACCTGC ACAACCTATC CGGTGTCGCA CAAAAGTTGA AGGTCCGGAT CGAGAACGCC GATGGCCTGA AGATCCAGAA CGCCGAACGC GAACTGGAGC TCAAGGATCA GCAGAAACAG ACCCTGCGCT TCCCGCTCGA AGCCGGCAAT GCCTTCGGCC TGGCCGATGT CCGGGTGGTG GTCAGCAGTG CGGCCGGCCT CAAGCTGGAG CGCAGCTTTG GCCTGCAGGT TCAGGCCGCG ACACCACAGC AGCAGGTGCT GAAAATGCTG GCTGTCGGGC CGGGTGAAAC GGTCGAGGTC AAGGAGGCTG AACTCGGCGG TTTCCTGAAG AGCACCGTCC AGTCGCACCT GATCCTCTCC GACAAGGCGC CGATCGACGT GCGCAGTGCC ATCCAGGGCT TGCTGACCTA TCCGTACGGC TGCGCCGAGC AGACCACCAG CACCGCCTAC CCGCATGTGC TGGTCGATGA GGAAGGCGCC AAGCTGTTCG GCCTGAAGCC TTACAGCCGC GACCAGCGGG CCGACATGCT GGAGAAGGCG ATCGCCAAGC TGGGCGCCAT GCAGGCGCCG AATGGCGGCT TCAGCCTGTG GGGCAACATG TCAGAGTACC AGTACTGGCT CTCGGCCTAC ATCAGCAACT TCCTGCTTGA TGCCCGCGAA CAGGGCTTCA AGGTGCCGGA AGCGATGCAG AAGAACGCCA TGGAATTCCT GCTCAAGAAT CTGCAGGAAG GGGCGGCCGG CTTGCCGAGT GGCAAGGTGA CCTACAACCA GAACGGCTGG CAGGATTACC GCTACGGCGG CTCCGGTCGC TTCGGCGTGC TGGCCTATGG CGCCTACGTG CTGTCCCGTG AAGCCAAGGC GCCATTGTCG ACGCTGCGCC AGATGTTCGA CCTGCGCGAG CAGGCACATT CCGGCCTGGC GCTGGTCCAT CTCGGTCTGG CGTTGAAGCT GATGGGCGAC GAAACGCGTG CCCAGACGGC GCTGGCCGAA GGCGTCAAGA AGAGCCGCGA TACCGGCTAC TGGTGGGGCG ACTACGGCAG TCCGCTGCGC GATGCGGCGC TGTCCTACGC CTTGCTCGAC CGTCACAAGC TGAAGGTTGA AGGCCAGGAC AATCTGGTCG CCGTTGCAGC CGCCGAACTG GGCAAGAACC GCTACACCAG CACCCAGGAA AAACTGGCGC TCTTCCTGCT CGGCCGCAAT TTCGCCAAAG CCGGCGAGGG CGAGGCCGGC TGGACGGCGG AAGTGCTCGG CAAGGAAAAG CCGGAAACCA TCAATGGCTC CGGTACCCTG ATCCGGCCTC TGTCCGCTGC TGCCTTGCAG GGCGGCGTTC GGATCAAGAA TACTCACAAG GAAAGGCTCT ACCTGCAACT CGCCTACAGC GGCAACCCGG CCAAGATGCC TGCCAATCGC GACGACGCCA TCGCCCTGAC GCGCGACCTG TTCGAAGCCG ACGGCAAGCC GCTGAAGAGC CGGGCGCTGA AGGTCGGTGA GTCGGTTATC GTCCGCATCA ACGTCAATCC GCGCAGTTGG ATCAATACCG GCATGGTGGT CGATCACATT CCGGCCGGCC TCGAGATCGA GAATCTCAAC ATCGCTCAGG GCGAGGGCAT GGCCAGCACG CTGATCAACA ACGTCAATCC GGCCGAGGCG ATGCAGGATC CGCGCATCCA GCACGTCGAG TTCCGCGATG ACCGTTTTGT GGTTGCGGCC CGTCTGCAGG GCAGGCTCAG CCTGTTCTAC CGCGCCCGTG TCGTCACGCC CGGCAAATTC GTCTTCCCGC CGATCTACGC GGAAGACATG TACCGGCCGG ACGTTTACGG CCTAGCGACC GGCGATGCCA CGCTGACGGT GACCGACGGG AAGGAAAAGC CGGCGGCTGT TCCGGTGCCT GCACCAGCCG CAGCGCCGGC AGTTGTGCCA ACGCCAGCCC CGGCCAAGCC CTAA
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Protein sequence | MSGLSKSRGF GAVAWLVALA VAIAAVLIYA KPWQSETASA GDGPFEIADF SNRDFEGSPS LALSFTLPMD AKKGYDEQIQ VFEMPPRPGD AKAQVNESED EGEEGAPGSA NPQVSTEPAD VATDGGKLIK GAWVVGDNPR ILYFPHIKPQ TRYVVRVAAG LSSLSGQKLN EEGRYSVVTA TVAPAYYFAS RGTVLPAKQN GGLPVVTVNV PEVDVQFLRV KPDQLPRFLD KVISGPRPQA RAKRQNNDDY DYDVEYDGDY DWRATSLKGA VNNWSLDSLH NLTESVFVGR FLTEQKPNKR NVTFLPVEDI KELREPGIYI AVMSQPNRFR YDYQVTYFYV SDLGLSTRLF AKGADAYVSS LTTGKAVSGV EVAWMDENAK VVGRAETDSS GRANFAERPA AAKVIIARHG QQISMVTLKE PALDLSEYDV AGLPGRPVRL FAYSGRNLYR PGEKFDISVL ARDADGRPVP AQPIQAILRR PDGKSQFTAT WQPDAKLGGY YQSRIELPVD AATGAWTLEL RADPADKLAT TSFRFGVEEF LPERMKLDLN SKQATVSPDE SLKIDIKGAY LYGAPAAGNQ LLGVAVFERQ KNPLAQKLPG FEFGDTNEDS QRQRVELEQN QLDENGDLAL EVDLAPAKGK RSPYTVRTTL SLLESGGRPV VRNFERVIWP APVLVGVRPL FTGDYAREGS VAQFEVIRAN AEAKLHGGKA LPVRLFRENR DYYWRFDDQR GWHSGFTETD ELVDTTVVSI PDGSRGKLGL PVKYGRYRVE ITDSETGQIT KYRFYAGWSA RGDETQGVRP DRVALKFDKP AYKDGETAKL TITPPHAGEA LVTVEADKTL WLKRVSVPLE GTTIDIPVDK DWKRHDLYVS AVVLRPGSAG EKVTPARALG LTHLPLERGD RKLAVSLDAP KKMLPDTRLK VKVKVPGLTG QQAVVTLSAV DVGILNITRY ATPDPHGHFF GKLRYGADQY DVYGRLIEKM GGQKGKLKFG GDAAPKATKS LPKKVRLVDL FSGPVQLNEQ GEAEIGLDVP DFNGTLRLMA VVAAPDKFGS AEAETIVAAP LVAELMTPRF LTVGDNATIA LDLHNLSGVA QKLKVRIENA DGLKIQNAER ELELKDQQKQ TLRFPLEAGN AFGLADVRVV VSSAAGLKLE RSFGLQVQAA TPQQQVLKML AVGPGETVEV KEAELGGFLK STVQSHLILS DKAPIDVRSA IQGLLTYPYG CAEQTTSTAY PHVLVDEEGA KLFGLKPYSR DQRADMLEKA IAKLGAMQAP NGGFSLWGNM SEYQYWLSAY ISNFLLDARE QGFKVPEAMQ KNAMEFLLKN LQEGAAGLPS GKVTYNQNGW QDYRYGGSGR FGVLAYGAYV LSREAKAPLS TLRQMFDLRE QAHSGLALVH LGLALKLMGD ETRAQTALAE GVKKSRDTGY WWGDYGSPLR DAALSYALLD RHKLKVEGQD NLVAVAAAEL GKNRYTSTQE KLALFLLGRN FAKAGEGEAG WTAEVLGKEK PETINGSGTL IRPLSAAALQ GGVRIKNTHK ERLYLQLAYS GNPAKMPANR DDAIALTRDL FEADGKPLKS RALKVGESVI VRINVNPRSW INTGMVVDHI PAGLEIENLN IAQGEGMAST LINNVNPAEA MQDPRIQHVE FRDDRFVVAA RLQGRLSLFY RARVVTPGKF VFPPIYAEDM YRPDVYGLAT GDATLTVTDG KEKPAAVPVP APAAAPAVVP TPAPAKP
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