Gene Daro_0381 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0381 
Symbol 
ID3569684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp413527 
End bp414624 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content64% 
IMG OID637678823 
Productferredoxin:oxidoreductase FAD/NAD(P)-binding:oxidoreductase FAD-binding region 
Protein accessionYP_283610 
Protein GI71906023 
COG category[C] Energy production and conversion 
COG ID[COG0633] Ferredoxin
[COG1018] Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 
TIGRFAM ID[TIGR02160] phenylacetate-CoA oxygenase/reductase, PaaK subunit 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value0.155408 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00902786 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGTCAGCCC TCCGTTTTCA CGAACTCACC ATCAAGCGCG TCAGCCCCGA AGCGGCCGGC 
TCGGTGGCGA TTACCTTCAA TATCCCTGAC GCCGAGCGCG AAGCCTTCAG CTTCCAGCCC
GGCCAGTTCC TGACCCTGCG CGCCAAGGTC GATGGCCAGG ATGTGCGCCG CAGCTATTCG
ATCAGCAGCC CGCGCAGCCG TCTGGCCAAG GCCGGCGAGC TGGAAATCGG CATCCGTCCG
GTCGAAGGTG GCGTCTTTTC CAACTGGGCG GCGCAAACCC TGAAGGCTGG CGCCAAGCTC
GACGTGATGC CGCCGGATGG TCGCTTTGTC GTCAAAAAGC AGCGCGCCAT TCACCGTGTC
GGTTTCGCCG CGGGGTCGGG CATTACGCCC ATCCTGTCGA TTGCCGCGAC GACGCTGGAA
GAACAGCCGG AAGCCAAATT CACGCTGGTC TATGGCAACC GCCGCATGTC CAGCGTGATG
TTCAACGAAT CCCTGCAGGA CCTGAAGGAC CGTTACCCGG ACCGTCTGAC GCTGATCCAC
ATCCTGTCGC GCCAGGCGCA GGAAGTCGAC CTGCTGCAAG GCCGGATCGA CGGCGCCAAG
GTTCAGGCCG TGATCGACGC CCTGCTGCCG GTCAAGAGCA TGGATGAAGT GTTCATCTGC
GGCCCGGAAG CCATGATCGA AGCGACCGAA AAGGCGCTGA TCGAAGCCGG CGTGCCGGAA
AGCCGCGTCT ATACCGAACG CTTCACCTCC GGCCCGGCCC AGGCCGCCAA GATCCAGGCC
GATACCGATG CCGCGCCGAC CCGCGTCGCT GCCGCCAAGG ACATCGCCCT GACCGTCGTT
CTCGACGGCA AGGAACATGA GCTGCAGATC GGCCCCGACG AGCATGTACT CGATGCTGCG
ATGAACGCTG GCCTCGACCT GCCGTTCTCT TGCAAGGCCG GCGTCTGCTG TACCTGCCGC
GCCAAGGTGT TGTGCGGCGA GGTGGTCATG GACAAGAACT ACACGCTGGA AGGCGACGAA
ATGGCGCAGG GTTTCGTGCT CAGCTGCCAG GCTCGCGCCA CGACTAAACG CCTGGTGGTC
AGCTTCGACG AACGCTGA
 
Protein sequence
MSALRFHELT IKRVSPEAAG SVAITFNIPD AEREAFSFQP GQFLTLRAKV DGQDVRRSYS 
ISSPRSRLAK AGELEIGIRP VEGGVFSNWA AQTLKAGAKL DVMPPDGRFV VKKQRAIHRV
GFAAGSGITP ILSIAATTLE EQPEAKFTLV YGNRRMSSVM FNESLQDLKD RYPDRLTLIH
ILSRQAQEVD LLQGRIDGAK VQAVIDALLP VKSMDEVFIC GPEAMIEATE KALIEAGVPE
SRVYTERFTS GPAQAAKIQA DTDAAPTRVA AAKDIALTVV LDGKEHELQI GPDEHVLDAA
MNAGLDLPFS CKAGVCCTCR AKVLCGEVVM DKNYTLEGDE MAQGFVLSCQ ARATTKRLVV
SFDER