Gene Daro_0317 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0317 
Symboltuf 
ID3569771 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp364312 
End bp365502 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content59% 
IMG OID637678759 
Productelongation factor Tu 
Protein accessionYP_283546 
Protein GI71905959 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value2.28692e-16 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000217605 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCTAAGG AAAAATTCGC GCGTACGAAA CCGCACGTAA ACGTTGGCAC GATTGGTCAC 
GTTGACCACG GCAAGACCAC GCTGACGGCT GCGATCACGA CGGTGCTGTC CGCCAAGTTC
GGTGGCGCTG CCAAGAAATA TGATGAAATT GACGCTGCGC CGGAAGAAAA GGCCCGCGGT
ATTACGATTA ATACCGCCCA CGTCGAATAC GAAACCGCCA ACCGTCACTA CGCCCACGTT
GACTGCCCGG GCCACGCTGA CTACGTCAAG AACATGATTA CCGGTGCTGC CCAGATGGAC
GGCGCGATCC TGGTCTGTTC CGCCGCTGAC GGCCCGATGC CGCAAACCCG CGAACACATC
CTGCTGGCTC GCCAGGTTGG TGTGCCGTAC GTTCTGGTGT TCATGAACAA GTGCGATATG
GTTGACGACG CCGAGCTGCT CGAACTGGTC GAAATGGAAC TGCGCGAGCT GCTCTCCAAG
TACGACTTCC CGGGCGACGA CACCCCGATC ATTCACGGCT CCGCCCTGAA GGCCCTCGAA
GGCGACCAAT CCGAAATCGG CGAACCGTCG ATCTTCCGTC TGGCCGACGC CCTGGACTCC
TACATCCCTG ATCCGGAGCG TGCCATCGAT CAGCCGTTCC TGATGCCGGT TGAAGACGTC
TTCTCCATCT CTGGTCGCGG TACCGTGGTG ACCGGTCGTG TTGAGCGCGG CATCGTCAAG
GTTGGCGAAG AAATCGAAAT CGTTGGTATC CGCCCGACCG TCAAGACCAT CTGTACCGGT
GTTGAAATGT TCCGCAAGCT GCTCGACCAA GGTCAGGCTG GCGACAACAT TGGCGCCCTG
CTGCGTGGTA CCAAGCGTGA AGACGTCGAG CGTGGTCAGG TGCTGTGCAA GCCGGGTTCT
GTCAAGCCGC ACACCCACTT CACCTCTGAA GTGTACATCC TGTCCAAGGA TGAGGGTGGC
CGTCACACCC CGTTCTTCAA CGGCTACCGT CCGCAGTTCT ACTTCCGCAC GACCGACGTG
ACTGGCTCCA TCGAGCTGCC GGAAGGCACC GAAATGGTTA TGCCGGGCGA CAACATCGCC
ATGACGATCA AGCTGATTGC GCCGATCGCC ATGGAAGAAG GTCTGCGCTT CGCCATCCGT
GAAGGCGGTC GTACCGTCGG CGCCGGCGTC GTCGCCAAGA TCATCGAGTA A
 
Protein sequence
MAKEKFARTK PHVNVGTIGH VDHGKTTLTA AITTVLSAKF GGAAKKYDEI DAAPEEKARG 
ITINTAHVEY ETANRHYAHV DCPGHADYVK NMITGAAQMD GAILVCSAAD GPMPQTREHI
LLARQVGVPY VLVFMNKCDM VDDAELLELV EMELRELLSK YDFPGDDTPI IHGSALKALE
GDQSEIGEPS IFRLADALDS YIPDPERAID QPFLMPVEDV FSISGRGTVV TGRVERGIVK
VGEEIEIVGI RPTVKTICTG VEMFRKLLDQ GQAGDNIGAL LRGTKREDVE RGQVLCKPGS
VKPHTHFTSE VYILSKDEGG RHTPFFNGYR PQFYFRTTDV TGSIELPEGT EMVMPGDNIA
MTIKLIAPIA MEEGLRFAIR EGGRTVGAGV VAKIIE