Gene Daro_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0315 
Symbol 
ID3569769 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp361714 
End bp362184 
Gene Length471 bp 
Protein Length156 aa 
Translation table11 
GC content57% 
IMG OID637678757 
Product30S ribosomal protein S7 
Protein accessionYP_283544 
Protein GI71905957 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0049] Ribosomal protein S7 
TIGRFAM ID[TIGR01029] ribosomal protein S7, bacterial/organelle 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value9.99875e-22 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000536681 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGCCCCGTC GTCGTGAAGT ACCCAAGCGT GACATTCTGC CGGATCCGAA GTTCGGCAAC 
GTTGAAGTCT CCAAGTTCGT TAACGCCATC ATGCAAAGCG GCAAGAAGTC TGTAGCCGAG
CGCATTGTTT ATGGTGCTTT CGATATCATC ACCACCAAGG GTGGCAAGGA TCCTCTCGAA
GTCTTTAGCG CTGCCATGAG CAACGTGAAG CCGATGGTCG AAGTCAAGTC CCGTCGTGTC
GGTGGTGCAA ACTATCAGGT GCCGGTTGAA GTGCGCCCGG CTCGTCGCGC CGCGCTGGCA
ATGCGCTGGC TGCGTGAGTC CGCTCGCAAG CGTTCGGAAA AGTCCATGGG TCAGCGTCTG
GCTGCTGAAA TGCTTGAGGC TGCCGAAAAC CGTGGTGGCG CTGTCAAGAA GCGCGACGAA
GTGCACCGTA TGGCTGAAGC CAACAAGGCC TTCGCCCACT TCCGCTTCTA A
 
Protein sequence
MPRRREVPKR DILPDPKFGN VEVSKFVNAI MQSGKKSVAE RIVYGAFDII TTKGGKDPLE 
VFSAAMSNVK PMVEVKSRRV GGANYQVPVE VRPARRAALA MRWLRESARK RSEKSMGQRL
AAEMLEAAEN RGGAVKKRDE VHRMAEANKA FAHFRF