| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0291 |
|---|
| Symbol | |
|---|
| ID | 3570177 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | - |
|---|
| Start bp | 332243 |
|---|
| End bp | 333418 |
|---|
| Gene Length | 1176 bp |
|---|
| Protein Length | 391 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 637678729 |
|---|
| Product | penicillin-binding protein 6 |
|---|
| Protein accession | YP_283520 |
|---|
| Protein GI | 71905933 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1686] D-alanyl-D-alanine carboxypeptidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 61 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 0.774777 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCCTCCC CCAACGCAAA ACAAAGTACA AACCCCATGT CGCTGTTCCG CAAGACCGCT
TTCATCCTCC TCAGTATTGT CACCGCTGGC CAGGCCATGG CCCAACAGCT TCCCGTCCCG
CCTGCATTGG CCGCCAAATC CTGGCTGCTG CTGGAAGTCG GTTCGAACCA GGTTTTGACC
GCCGAAAAAT CTGACGAGCG CCTCGAACCG GCCTCGCTAA CCAAACTGAT GACGGCCTAC
CTGACTTTCG CCGCCATCCG CCAGAAAACC ATCGGCCTGA GCCAGACCCT GCCCGTCTCC
GAAAAGGCCT GGCGCACCGG CGGTTCGAAG ATGTTCGTCC GGGTCGACAC GCAAGTGCCG
GTGGAAGACC TGATCAAGGG CATGATCGTC CAGTCCGGCA ACGACGCCTG CGTCACGCTG
GCCGAAGGCA TCGCCGGCAG CGAAGAGAAT TTCGCCCAGA TGATGAACCG CGAAGCACAG
CGCCTGGGCA TGACCAACAG TCACTTCATC AACTCGACCG GCCTGCCCGA TCCGCAGCAC
TACACCACCG CCCGCGACCT CTCCCTGCTC GCCTCCGCAC TGATCCGCGA CTTCCCCGAG
GACTACAAGA AGTACTACTC GATGAAGGAA TTCCGCTACA ACAACATCAC CCAGCCGAAC
CGCAACCGCC TGCTCTTCAT CGATCCGACG GTTGATGGCG TCAAGACCGG CCACACCGAA
GCCGCCGGCT ATTGCCTGAT TTCCTCGGCC CTGCGCGACA AGCGCCGCCT GCTGTCGGTG
GTGCTCGGCA CGACCTCGGA CAGCGCCCGC GCGACCGAAT CGCAAAAGCT CTTGAACTGG
GGCTTTATCT CCTACGACTC CGTGGCACTT TTTGCCAAGG ATCAGGCTGT CGCCACCCTG
CGCGTCTGGA AGGGCGCCCA GAGCGAGGTC AAGGCCGGCT TCACCAGTGA TCTCGGCATT
GCGGTTCCGA AGGGCTATGC CGACAAGGTC AAGAGCGATT TCATCGCCGA GCCGCGCCTG
ATCGCCCCGG TCGAAGCGGG CCAGAAAATC GGCACGCTGA AGGTCAGTAT CGACGGCAAG
CCGTACAACG AATATCCGGT CGTCGCTCTT GAAAATATCG CACTCGGCAA TATCTTCATT
CGTATCATCG ATACCATCCG ACTCTGGTTC AACTAA
|
|---|
| Protein sequence | MSSPNAKQST NPMSLFRKTA FILLSIVTAG QAMAQQLPVP PALAAKSWLL LEVGSNQVLT
AEKSDERLEP ASLTKLMTAY LTFAAIRQKT IGLSQTLPVS EKAWRTGGSK MFVRVDTQVP
VEDLIKGMIV QSGNDACVTL AEGIAGSEEN FAQMMNREAQ RLGMTNSHFI NSTGLPDPQH
YTTARDLSLL ASALIRDFPE DYKKYYSMKE FRYNNITQPN RNRLLFIDPT VDGVKTGHTE
AAGYCLISSA LRDKRRLLSV VLGTTSDSAR ATESQKLLNW GFISYDSVAL FAKDQAVATL
RVWKGAQSEV KAGFTSDLGI AVPKGYADKV KSDFIAEPRL IAPVEAGQKI GTLKVSIDGK
PYNEYPVVAL ENIALGNIFI RIIDTIRLWF N
|
|---|
| |