| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0253 |
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| Symbol | |
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| ID | 3569645 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 295487 |
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| End bp | 296809 |
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| Gene Length | 1323 bp |
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| Protein Length | 440 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637678691 |
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| Product | putative branched-chain amino acid transport system substrate-binding protein |
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| Protein accession | YP_283482 |
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| Protein GI | 71905895 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0683] ABC-type branched-chain amino acid transport systems, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 0.0750632 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATTAAAA GCTTCAAACC TGCCCTGAGT GCTGTTGCGC TTTCCCTGGC GATGCTGTCT
CAAGGTGCAG CTGCCGCCGA AGAACAATTC TTCCCGCTGA TCGACTACCG CGTCGGCCCC
TATGGCTCGA ACGGCCAGGC CTTCTACGGC GGCTTCATCG ACTACCTGAA CTACGTCAAC
ATCAAGGAAA AGGGCGTCAA TGGCGTTCAG ATGACCTGGG AAGAGTGCGA AACGGAATAC
AACAACGCCA AGGGCGTCGA GTGCTATGAG CGCCTGAAGA GCAAGGCCGC CAAGTCGGCC
GGCCCGATCC ACACGATGTC GACCGGCATC TCCTACGCCC TGGTCGACAA GTCGGCCCAG
GACAAGCTGC CACTGGCCAT GATGGGCTAC GGCCGGACCG ATGCGGTCGA TGGCTCGGTC
TTCCCCTATG CCTTCCCGCT GGTCACCACC TACCAGATGC AGGCCTCGGC CATCGTCAAG
TTCATCAAGG ACAAGAACGG TGGCAACCTG GCTGGCAAGA AGATCGTTTA TCTGTATCAC
GACTCCGCCT ACGGCAAGGA AGCCATCATC GCGATGGAAG CCGAGGCATC GCTGAACAAA
TTCACGCTGG TCCAGATTCC GGTCGCCCAC CCAGGCAACG AGCAGGGCGC CCAGTGGCTG
AAGATCCGCC AGGAAAAGCC GGACTACGTG GTGTTCTGGG GCTGGGGCGT GATGAACCAG
ACGGCGCTGA AGGCGGCCCA GAAGGTCGGC TTCCCGCGTG ACAAGATGAT CGGCTCGTGG
TGGACCGGTT CGGAGGAAGA CGTCATCCCG GCCGGCGATG CCGCCAAGGG CTACATGGCC
GCGACCTGGA ACGTCGCCGG CAAGCAGGTA CCGGTTATCG CCGACATCGA GAAGGTGGTC
TACGGCGCCG GCAAGGGCAA CCTGCAGGAT GTCGCCAAGA TCGGCACCGT CCTCTACAAC
CGTGGTGTTT CTGCCGCCGT GCTGTCGGTC GAGGCGATCC GCAAGGGTCA GGAGAAGTAT
GGCAAGGGCA AGGCGCTGAA CGGCGAGCAG ACTCGCTGGG CGCTGGAAAA CCTGAACATC
AACGATGCCC GCCTGAAGGC TTTGGGCGCC ACTGACCTGC TGCCGGAAAT CAAGACCTCC
TGCGACAACC ACGAAGGTTC CGGCAAGGTG AAGATCCAGC AGTGGGATGG TGCCAAGTGG
GTGCCGGTAT CCGGTTGGAT TGAAGGTAAT AAATCGCTGA TCCACCCGTT GTTCCAGGCC
TCTGCCAAGC AGTACGCCAA GGAAAAGGGC ATCACGCCGC GCGATTGCTC CAAGGAAAAA
TGA
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| Protein sequence | MIKSFKPALS AVALSLAMLS QGAAAAEEQF FPLIDYRVGP YGSNGQAFYG GFIDYLNYVN
IKEKGVNGVQ MTWEECETEY NNAKGVECYE RLKSKAAKSA GPIHTMSTGI SYALVDKSAQ
DKLPLAMMGY GRTDAVDGSV FPYAFPLVTT YQMQASAIVK FIKDKNGGNL AGKKIVYLYH
DSAYGKEAII AMEAEASLNK FTLVQIPVAH PGNEQGAQWL KIRQEKPDYV VFWGWGVMNQ
TALKAAQKVG FPRDKMIGSW WTGSEEDVIP AGDAAKGYMA ATWNVAGKQV PVIADIEKVV
YGAGKGNLQD VAKIGTVLYN RGVSAAVLSV EAIRKGQEKY GKGKALNGEQ TRWALENLNI
NDARLKALGA TDLLPEIKTS CDNHEGSGKV KIQQWDGAKW VPVSGWIEGN KSLIHPLFQA
SAKQYAKEKG ITPRDCSKEK
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