| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0228 |
|---|
| Symbol | |
|---|
| ID | 3569620 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Dechloromonas aromatica RCB |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007298 |
|---|
| Strand | + |
|---|
| Start bp | 254961 |
|---|
| End bp | 256604 |
|---|
| Gene Length | 1644 bp |
|---|
| Protein Length | 547 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 62% |
|---|
| IMG OID | 637678666 |
|---|
| Product | FAD dependent oxidoreductase:electron transfer flavoprotein-ubiquinone oxidoreductase |
|---|
| Protein accession | YP_283457 |
|---|
| Protein GI | 71905870 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0644] Dehydrogenases (flavoproteins)
[COG2440] Ferredoxin-like protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 51 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 23 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATGC GTACCGATCG CGATGCGATG GAATACGATG TCGTGATCAT CGGCGGCGGC
CCTTCGGGGC TGTCGGCGGC GATCCGCATC AAGCAGCTGG CCGAACAGGC TGGCAAGGAA
GTGTCGGTCT GCCTGCTGGA GAAGGGCTCC GAAATCGGCG CCCATATCTT GTCGGGCGCC
GTGCTGGAAC CGCATGCCCT GAACGAACTG TTCCCGGACT GGAAGGAGCG CGGTGCGCCC
CTGAACACGC CGGCCGGCGA GGATCGCTTC CTGTTCCTGA CTGAAGGCGG TTCGTTCAAG
CTGCCGACGC CGCCGCAGAT GTCCAACCAC GGCAACTACA TCATCAGCCT GGGCAACCTC
TGCCGCTGGC TGGGTGAGCA GGCCGAGGCG CTGGGTGTCG AGATCTACCC GGGCTTCGCC
GCCGCCGAGG TGCTCTATCA CGAGGACGGT TCGGTCAAGG GCGTCGCTAC CGGCGACCTG
GGCATCGGCA AGGATGGCCA GCCGGGCCAT AACTTCCAGC CGGGCATGGA GTTGCATGCC
AAACAGACCA TCTTCGCTGA AGGCTGTCGC GGTTCGCTGA CCAAGGAATT GTTTGGCCAG
TTCAACCTGC GCGACGGCGT CGATCCGCAA ACCTACGGCA TCGGCATCAA GGAACTGTGG
GAAATCGACC CGGCCAAGCA CCAGCCCGGC CTGATCGTGC ATACGGTGGG CTGGCCGGTG
GATTCGGCCA CCTATGGCGG TTCCTTCCTC TACCACCTGG AAAACAACCT GGTGGCGGTG
GGCTATGTCG TCGGCCTCGA CTACAAGAAC CCGTGGCTGT CGCCGTACGA GGAATTCCAG
CGCTACAAGA CGCACCCGGC CATTCGTGGC TTCTTCGAGG GCGGCCGGCG CATTTCCTAC
GGTGCCCGCG CGCTGTCCGA AGGCGGTTAC CAGTCCGTGC CCAAGCTGCA TTTCCCGGGC
GGCCTGCTGG TTGGCGATAC CGCCGGCTTT CTCAACGTGC CGAAGATCAA GGGCACGCAC
ATGGCCATGG AATCCGGCAT CGTTGCCGCC AAGGCGGTGT TCGAGCACCT GTGCAAGGAC
AACGCCGGGG CCGAGGTCGT CGAGTATGGC GAACAGATCA AGCAGAGCTG GCTGTGGGCC
GAGTTGTACA AGGTCCGCAA TATCCGTCCG GCCTTCAAGT GGGGCTTGCT GGGTGGCCTG
GCCTACGGCG CCATCGACAC CTTCCTGTTC GGCGGCAAGG CGCCGTGGAC CATGCGTCAT
CACGACGACC ACAGCCAGCT GGGCGACAAG AACGCTTATC CGAAAATCGA TTACCCGAAG
CCGGATGGCA AGATCAGCTT TGATCGCCTG TCCTCGGTTT TCCTGTCGGC GACCAACCAC
GAGGAAAACC AGCAGACGCA CCTGCGCCTG AAGGATGAGT CGGTGGCCAT CTCAGTCAAT
TACGCCAAGT ACGGTGCACC GGAAACGCGT TATTGCCCGG CCGGCGTGTA CGAAATCCTC
GGCGAGGAAG AGGGCAAGCC ACGGTTGCAG ATCAATGGCC AGAACTGTCT GCACTGCAAG
ACCTGCGACA TCAAGGATCC GACCCAGAAT ATCAACTGGA CGGTGCCAGA GGGGGGCGGC
GGGCCGAATT ACCCAAACAT GTAG
|
|---|
| Protein sequence | MTMRTDRDAM EYDVVIIGGG PSGLSAAIRI KQLAEQAGKE VSVCLLEKGS EIGAHILSGA
VLEPHALNEL FPDWKERGAP LNTPAGEDRF LFLTEGGSFK LPTPPQMSNH GNYIISLGNL
CRWLGEQAEA LGVEIYPGFA AAEVLYHEDG SVKGVATGDL GIGKDGQPGH NFQPGMELHA
KQTIFAEGCR GSLTKELFGQ FNLRDGVDPQ TYGIGIKELW EIDPAKHQPG LIVHTVGWPV
DSATYGGSFL YHLENNLVAV GYVVGLDYKN PWLSPYEEFQ RYKTHPAIRG FFEGGRRISY
GARALSEGGY QSVPKLHFPG GLLVGDTAGF LNVPKIKGTH MAMESGIVAA KAVFEHLCKD
NAGAEVVEYG EQIKQSWLWA ELYKVRNIRP AFKWGLLGGL AYGAIDTFLF GGKAPWTMRH
HDDHSQLGDK NAYPKIDYPK PDGKISFDRL SSVFLSATNH EENQQTHLRL KDESVAISVN
YAKYGAPETR YCPAGVYEIL GEEEGKPRLQ INGQNCLHCK TCDIKDPTQN INWTVPEGGG
GPNYPNM
|
|---|
| |