Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0218 |
Symbol | |
ID | 3569610 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 238270 |
End bp | 239736 |
Gene Length | 1467 bp |
Protein Length | 488 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637678656 |
Product | glutamate synthase (NADH) small subunit |
Protein accession | YP_283447 |
Protein GI | 71905860 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases |
TIGRFAM ID | [TIGR01317] glutamate synthases, NADH/NADPH, small subunit |
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Plasmid Coverage information |
Num covering plasmid clones | 50 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCAAGC CGACTGGATT CATGGAGTTC GAGCGTCTCA ACGAGAGCTA CGACCCGGTT GAACAACGCC TGAAGCATTA CAAGGAGTTC GTGCATACGC TGAACGACGA GGATGCAAAG ATTCAGGGCG CCCGCTGCAT GGACTGTGGC ATTCCGTTCT GCAACAACGG CTGCCCGGTG AACAACATCA TTCCGGACTG GAATGACCTG GTTTACCGCG GTAACTGGAA GCAGGCGCTG GATGTGCTGC ACTCCACCAA CAACTTCCCG GATTTCACTG GCCGCATCTG TCCGGCGCCC TGCGAAGCTG CTTGTACGCT GGGCATCAAC GCAGCACCGG TCGGTATCAA GTCGATTGAG CATTTCATCA TCGACAAGGG CTGGGAATCT GGCTGGGTCG TGCCGCAGCC GCCGAAAGCC AAGACCGGCA AGAAGGTTGC CGTCGTGGGT TCCGGCCCGG CGGGTCTGGC AGCCGCTCAG CAACTGGCGC GTGTTGGTCA TGATGTGACG GTTTTCGAGA AGAGCGACCG CATCGGCGGC TTGCTCGGTT ACGGCATTCC TGACTTCAAG CTGGAAAAGA CGGTGATTGA TCGCCGTGTT GCCCAGATGG AAGCCGAAGG CGTTACCTTC AAGACGAAGG TCGTGGTTGG CGACAAGGCC GTGCCGGCCG GCATCAACAA CGACGCGATC GAGTTCGTTT CAGCTGACCA GTTGAAGAAG GATTTCGATG CGGTGATTCT GGCTGCAGGT TCCGAAGTGC CGCGCGATCT GCCGGTGCCG GGCCGTGAGC TGAAGGGCAT CTACGCTGCG CTGGAATTCC TGATTCCGCA GAACAAGGAA GTCCAGCAGG GCAAGGCCAA CCCGATCAAC GTCAAGGGCA AGCACGTCAT CGTTATCGGT GGCGGCGACA CTGGCTCTGA CTGTGTCGGA ACCTCAAACC GCCATGGTGC TGCCTCAGTC ACCCAGTTCG AACTGATGCC GATGCCGCCG GAAGAAGAGA ACAAGGCGCT GACTTGGCCA TACTGGCCGT ACAAGTTGCG TACCTCTTCT TCGCACGACG AAGGCTGCAG CCGTGACTTT GCTGTTGCGA CCAAGGGTTT TATCGATGAT GGCAAGGGTA ACGTCAAGGC GCTGAAGGCC GTTCGTCTGG ACTGGAAGGA CGGCAAGATG AGCGAAGTTG CCGGTTCGGA ATTCGAGCTG CCGTGCGACA ACGCCTTCCT GGCCATGGGC TTCACCAATC CGGTTGGCGG TCTGCTGGAT GCCTTTGGCG TCGAGAAGGA TGCGCGCCAG AATGCCAAGG CAACGACCGA TGGCGAGGGT TGCTACAAGA CCAACGTCGA CAAGGTTTAC GCCGCTGGTG ACGTGCGCCG CGGCCAGTCG CTGGTGGTTT GGGCAATTCG CGAAGGTCGT CAGGCGGCTC GTGAGGTCGA CGCATTCCTG ATGGGTTCGA CGACGCTGCC GCGTTAA
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Protein sequence | MGKPTGFMEF ERLNESYDPV EQRLKHYKEF VHTLNDEDAK IQGARCMDCG IPFCNNGCPV NNIIPDWNDL VYRGNWKQAL DVLHSTNNFP DFTGRICPAP CEAACTLGIN AAPVGIKSIE HFIIDKGWES GWVVPQPPKA KTGKKVAVVG SGPAGLAAAQ QLARVGHDVT VFEKSDRIGG LLGYGIPDFK LEKTVIDRRV AQMEAEGVTF KTKVVVGDKA VPAGINNDAI EFVSADQLKK DFDAVILAAG SEVPRDLPVP GRELKGIYAA LEFLIPQNKE VQQGKANPIN VKGKHVIVIG GGDTGSDCVG TSNRHGAASV TQFELMPMPP EEENKALTWP YWPYKLRTSS SHDEGCSRDF AVATKGFIDD GKGNVKALKA VRLDWKDGKM SEVAGSEFEL PCDNAFLAMG FTNPVGGLLD AFGVEKDARQ NAKATTDGEG CYKTNVDKVY AAGDVRRGQS LVVWAIREGR QAAREVDAFL MGSTTLPR
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