| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0210 |
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| Symbol | |
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| ID | 3569905 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | + |
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| Start bp | 226740 |
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| End bp | 227825 |
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| Gene Length | 1086 bp |
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| Protein Length | 361 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637678648 |
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| Product | Type IV pilus assembly protein PilM |
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| Protein accession | YP_283439 |
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| Protein GI | 71905852 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4972] Tfp pilus assembly protein, ATPase PilM |
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| TIGRFAM ID | [TIGR01175] type IV pilus assembly protein PilM |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 0.150692 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGGGCTTCG ATATCTCAGC GTTGTTAAAT CCCAAGGCGC GTCCCTTGTT CGGGTTGGAC
ATAAGTTCGT CCGCCGTAAA AATGGTTGAG CTGACCGCAA ATGGGAAAGA CGGCTATCGC
GTTGAGCGCT ACACCATTGA GGTGTTGCCG AAGGATGCGG TGTCCGATGG CAATATCGCC
AACTTGGATG GCGTTGTCGA TTGCGTAAAG CGTGCGTGGA AGCGCATGGG TACGTCGACA
CGTAATGTCG CCATGGCTTT GCCAGGTTCT GCGGTTATCA CCAAGAAAAT CATCGTTCCG
GCAGGTTTGA GGGACGACGA GCTTGAGGCT CAGGTCGAAA CGGAGGCTAA TCAGTACATT
CCGTTTTCGA TCGATGAAGT GAACTTGGAT TATCAAGTAA TCGGGCCGGC GCCAGCTGTG
CCGGATGAGC TTGAGGTTTT GATTGCTGCG TCGAAAAAAG AACGTGTCGA GGATCGTGTC
GCAGTTGCCG ATGCAGCTGG CCTCAAGGCG CTCGTCGTGG ATGTCGAGTC TTTTGCCGTG
CTGGCCGCAT TTGAGCTGAT TGAGCGTCAA TTGCCGGATT CCGGTAAAAA TCAGGTTGTG
GCCATGATCG ATGCCGGCGC CAATGTGATG AACTTGACTG TGCTTAGAAA TGGCCAGCAG
GTATATGCTC GCGAACAAGC TTTTGGCGGC GGTCAATTAA CACAAGATAT TGCGCGTCAC
TACGGAATGA GCTTTGAAGA CGCCGAGGCG GCCAAAAGAG CGGGAAACCT GCCGGAAGGT
TACGAGGTGG AGTTGTTGAA CCCGTTTATG GAGAATTTGG CGCTTGAAGT CTCGCGCGCC
TTGCAGTTCT TCTTTACTTC GACCCAATAC AATCAAGTCG ACCACATTGT CCTTGCTGGG
GGATGTGCGG TGATCCCCGG GATTGACGAA GTCGTCGCTA CCCGTACGCA GGTCAATACC
CTTATTGCCA ATCCGTTTGC CAACATGGTG CTCTCCGATC GTGTGCGAGC GAAGAGCCTT
TTGGCTGATG CATCATCCTT GATGGTGGCC TGTGGCTTGG CTTTGCGGAG GTTTGATCCA
TCATGA
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| Protein sequence | MGFDISALLN PKARPLFGLD ISSSAVKMVE LTANGKDGYR VERYTIEVLP KDAVSDGNIA
NLDGVVDCVK RAWKRMGTST RNVAMALPGS AVITKKIIVP AGLRDDELEA QVETEANQYI
PFSIDEVNLD YQVIGPAPAV PDELEVLIAA SKKERVEDRV AVADAAGLKA LVVDVESFAV
LAAFELIERQ LPDSGKNQVV AMIDAGANVM NLTVLRNGQQ VYAREQAFGG GQLTQDIARH
YGMSFEDAEA AKRAGNLPEG YEVELLNPFM ENLALEVSRA LQFFFTSTQY NQVDHIVLAG
GCAVIPGIDE VVATRTQVNT LIANPFANMV LSDRVRAKSL LADASSLMVA CGLALRRFDP
S
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