| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0209 |
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| Symbol | |
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| ID | 3569904 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 224264 |
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| End bp | 226579 |
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| Gene Length | 2316 bp |
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| Protein Length | 771 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637678647 |
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| Product | penicillin-binding protein 1A |
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| Protein accession | YP_283438 |
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| Protein GI | 71905851 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG5009] Membrane carboxypeptidase/penicillin-binding protein |
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| TIGRFAM ID | [TIGR02074] penicillin-binding protein, 1A family |
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Plasmid Coverage information |
| Num covering plasmid clones | 44 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 29 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTCAA CCCACTCAGC GCTGCGTCTG ATCCTTTACC CTGTCATTTT TCTGCTCGGA
CTTCTGGCCA TCGGAATAGC GATAGCATTG ATTGTCCTCG TTCTGGCCTA CCCGAACCTC
CCCTCGCTTG AGGTGCTGAC CGACTATCGC CCAAAGATAC CTTTACGCGT GTATACCGCT
GACGGCTTCC TGATTGGCGA ATACGGCGAA GAGCGTCGCG CCGTGGTTGC GATCAAGGAC
GTTCCGCCGA TCATGAAGCA GGCCATTCTC GCCGCTGAAG ACGATCGCTT CTATCAACAC
GGCGGTATCG ACTACACCGG GATACTGCGT GCGGCGGGAG CCAACCTGAT TGGCGGCGGA
AAACGCCAAG GCGCATCGAC TATCACTCAA CAAGTTGCCA GGAACTTCTT TCTGACCGGA
GAGAAAACCT ACACGCGCAA ACTTTATGAG GCTCTTCTCT CTTTCAAGAT AGAAAGCAAT
CTGACGAAAG ACCAGATTTT CGAGTTATAC ATCAATCAGA TATTCCTCGG CCAGCGCGCC
TATGGATTTG CTGCGGCCGC CCAGATTTAT TTCGGCAAGC CGCTAAAAGA CATCTCGATT
GCCGAAGCCG CCATGCTGGC CGGCCTGCCA AAAGCACCAT CGGCCTACAA CCCGGTCGTG
AACCCGACTC GCGCCAAGCA ACGCCAACAG TACGTACTGC GCCGTATGCA TGAATTGGGG
CATATCTCGG ATACCCAATA TGCCGCAGCC CTGAAGGAAC CTCTGATCGT CAAGCGCGAA
CTGGCTGGCT ATGCCGTTCA TGCCGAGTAT GTGGCCGAAA TGGCGCGCCA GATCACCGCC
GAACGCTTTC CGGAAGAAGT TTATTCACGC GGCATGAAGG TTTATACGAC ACTGATCAAG
GCCGAACAGG AAGCCGCCTA TATCAGCCTG CGCAAAGGCG TCATGGACTA TGACCGACGG
CATGGTTATC GAGGCGCCGA ATCCTATCTG GACATGAAGG ACATCAAGTC CGATCAGGAC
GAAGCTATCG ACGAAGCCCT TCAGGACATT CCCGATACCG GCGATCTTAT TCCGGCTTTG
GTCCTGTCGG CAGATCCAAA ACAGATCAAG GTCTACCGCA AGGGTGGCGA AGTGGTGACG
CTGACCGGTG ATGCCATGAA ATTTGCGGCC AAGATGCTCG ACGACAAGGC ACCGCCAAAC
AAACGCCTGA AGCGCAGCGC CATCGTTCGC CTGCAGAAGG ACGACAAGGG CAACTGGCAG
ATCAGCCAAC TGCCAGAGGT TGAATCCGCA TTTGTCGCGG TAGACCCGAA GGACGGCGCC
ATTCGCGCCT TGGTTGGCGG TTTCGATTTC AATCGCAACA AGTTCAACCA TGTCACGCAG
GCCTGGCGGC AACCGGGTTC CAGCTTTAAA CCATTCATCT ACTCCGCATC GCTGGAAAAA
GGTTTCAGCC CGAACAGCGT GATCGCCGAC GAACCAATCG TCATTCCGGC CAGCCAGACC
GGCACCCAGG CTTGGGAGCC GCACAACTAC GATGGCAAGT ATGAAGGCCC GATGAAGATG
CGTACCGCGC TGGCCAAGTC CAAGAACATG GTATCGATCC GCATTCTGCA GGCTATCGGG
ACGCAATATG CTCAGGACTA CGCCGGGCGC TTCGGTTTTG ATCCCGCCAA GCACCCGCCT
TACCTGACCA TGGCCCTCGG CGCCGGTTCG GTCACCCCGT GGCAAATGGT TACCGCGTAC
TCCGTGTTCG CCAACGGTGG TTTCAAGGTC AGCCCATTCG TCGTCCGCGA AATTCGTGAC
GAACGCGAGC AGATATTGGC CCACTCTGCG GAGATCGAAG CCGGCAGTGA CAATATCCGG
GTCATCGACC CGCGCAACGC CTTCATGATG GACACCATGT TGCGCGACGT CGCCATCTAC
GGCACGGCGG CCAAGGCATC GGCAATCCTG AAACGTCAGG ATCTGGCCGG GAAGACGGGT
ACGACAAACG AGTATGTCGA CGCCTGGTTC TGCGGCTACC AAATGACGGT TGCCGGCTGT
GCCTGGATTG GCTTCGACCA ACCGAGAAAA CTGGGCGACA AGGAAACCGG TGGCGCGGCC
GCACTGCCGA TCTGGATTGG CTACATGGCC CGTGCCCTGA AGGATGTACC GATGCAGGTG
CCGCAAGCAC CGGAAGGCCT CATCGCCTAT GGCGAAGGTC GTGACCGGAG CTATATCTAT
GCCGAGAATG CCGCCAAGGA ACGTACGCCT GAAGAAGAAA GCCAGGATGC GACGCCTCTG
CCCAAACCGG ACCTGAGTAC GCCACCCAGC GACTAA
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| Protein sequence | MPSTHSALRL ILYPVIFLLG LLAIGIAIAL IVLVLAYPNL PSLEVLTDYR PKIPLRVYTA
DGFLIGEYGE ERRAVVAIKD VPPIMKQAIL AAEDDRFYQH GGIDYTGILR AAGANLIGGG
KRQGASTITQ QVARNFFLTG EKTYTRKLYE ALLSFKIESN LTKDQIFELY INQIFLGQRA
YGFAAAAQIY FGKPLKDISI AEAAMLAGLP KAPSAYNPVV NPTRAKQRQQ YVLRRMHELG
HISDTQYAAA LKEPLIVKRE LAGYAVHAEY VAEMARQITA ERFPEEVYSR GMKVYTTLIK
AEQEAAYISL RKGVMDYDRR HGYRGAESYL DMKDIKSDQD EAIDEALQDI PDTGDLIPAL
VLSADPKQIK VYRKGGEVVT LTGDAMKFAA KMLDDKAPPN KRLKRSAIVR LQKDDKGNWQ
ISQLPEVESA FVAVDPKDGA IRALVGGFDF NRNKFNHVTQ AWRQPGSSFK PFIYSASLEK
GFSPNSVIAD EPIVIPASQT GTQAWEPHNY DGKYEGPMKM RTALAKSKNM VSIRILQAIG
TQYAQDYAGR FGFDPAKHPP YLTMALGAGS VTPWQMVTAY SVFANGGFKV SPFVVREIRD
EREQILAHSA EIEAGSDNIR VIDPRNAFMM DTMLRDVAIY GTAAKASAIL KRQDLAGKTG
TTNEYVDAWF CGYQMTVAGC AWIGFDQPRK LGDKETGGAA ALPIWIGYMA RALKDVPMQV
PQAPEGLIAY GEGRDRSYIY AENAAKERTP EEESQDATPL PKPDLSTPPS D
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