| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daro_0133 |
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| Symbol | |
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| ID | 3569539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Dechloromonas aromatica RCB |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007298 |
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| Strand | - |
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| Start bp | 147199 |
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| End bp | 149283 |
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| Gene Length | 2085 bp |
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| Protein Length | 694 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 637678568 |
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| Product | diguanylate cyclase/phosphodiesterase |
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| Protein accession | YP_283362 |
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| Protein GI | 71905775 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 45 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATCGTC TCACCCTCCG CCATCGCCTG CTGTTGCTAA CGCTGCTCCC CAGCACGTTA
ATTGCCATCG CCCTGGTCAC TTATTTCACC TTCAGCGGCA TCAAGACGCT GGAAGGTGAA
CTTCGCCTCA AGGGCATGGC CACCGTCCGC TACCTGGCTC CGATCAGCGA ATACGGAATC
ATCGCGGGTC AGGTTGAAGG GCTGCACGGG CTAGCCCAAG CTACCGTCCA GGAATCCGGC
GTCAAGGCGG CCATCGTCGT TAATCAGAAA GGCCGCACTA TCGCCGTTAG TGGCCGGGTT
TCACTGGCGG CTGACGAGCT TCGCCAGATT CTGAGCGAAC CCAAGCAAGT CGCCGAAACC
GACCAATGGA TCGCCTTTGG CGCACCGGTA AAACGCTCGA TGAGCGACAC CGACCAGCTC
TTTGAAACCA ATGCCGGCAA GCCCGCCATT CCCGAAGTCA TCGGTCACGT CTTTGTCGAG
TTCGACAAGA CCGAGTTGGC CAACAAGCAA CGCCAGCTCC TGCAGCGCGG CTTGGTCATC
GTCCTCCTGG GTTTGCTCGT ACTCGCTGCC ATGGCCATCG CCATGGCGGA CAATCTGGCC
AAGCCCGTCA TGCGCCTGGT TCAGGCCGTG AAAGACATGT CGTCCGGCCG GCTGGACACC
CGTGTGCCAG CCAGCTCCAG TGGTGAACTC GGCGTCCTCG AAAATGGCTT CAACGAAATG
GCGGCAAAGA TCGAGGAAGT GCATCACTCG ATGCAGACCC GGATCGAGGA GGCTACCGCC
CAACTCGCCT TCCAGGCTCG CCACGACGCA CTAACCGGCC TGCTCAACCG GCGAGAATTC
GAGCACCGCC TGGAAAAAGC ACTGGCCAGC GTTCAGGCCG GCGGTGACGA ATTTGCCATC
CTGTTCCTCG ACCTCGACCG ATTCAAGCAG GTCAATGACA CCTGTGGCTA TCTGGCCGGC
GACGAACTGC TACGCCAGAT GGCGCTGCTC TTCCAGGGCC GCTTGCGCGA GGAAGACACT
TTGGCTCGAC TGGGCGGTGA CGAATTCAGC ATCATGCTGG CCAACTGCAC CGGCGCGCGC
GCCTTGCAAG TCGCCGATGA CATTTGCGGC CTTGCCGCCG CCTATCGCTT TATCTGGCAG
GACAAGGTTT TCGCCATCGG CGCCAGCGTT GGCATCACCA CGGTCAACCG CAAGGTGCGC
AACATCAACG AAATCCTCGC CGCCGGCGAT GCCGCCTGCC ATCGCGCCAA AGAAAGCGGC
CGCAACCGTG TCTGCGAACA AGAAGTGACC TTCAATCAGG AACGCCGCCA TGAAGCCAGC
AATTGGGCCA GTCGCATTGC CAATGCCCTC TCCGAGGACC GGTTGCTGGT CGAGGCAGTG
CCCTTGCGCG CCCTCCAGCA CGCTGCCAGC GGACATGTCG TCGAACTGAC GGCTCGCCTC
AACGAGCCTG GCCAGCCCCC AGTCGCCCTC GCCGCACTGA TCGACGCAGC CGAACGCTAT
GACCTGGCGC CCGCCATCGA CCGACGCCTG ATCGATACCG CCATCGCGGC GCAGGCGCGC
GCCAAACGTC AGCATCGCAA CCTGTATTGC CTAGTGCCGC TCTCACGTAG CTCGATCAGC
AGCCGGGAAA CAATCGACTA CATCGCCCGC AGCCTGTCCA GCCAGAACAT GGCCGGCAAC
AAACTCTGCT TCATGTTTTC CGAAGACATC CTGACCCATC TGACCAGTCA GGCCATGGAA
TTCTCTCGCC AAGTACATAC CCTTGGTTGC CAGATTGGTC TGGACGATTT TGGTGGGGGG
CTATCGTCTT TCAGCCACCT GCGCAGCATC ACCCCCAGCC ACGTCAAGCT GAGCCGCAGC
CTGACCCGGG ATCTTGGTGG CAACCGGGCG TCTACCGCCT TGCTGCGGGC AGTTCAGGAA
ATTACGGCGG ACCAGCACAT CCGTTCGATC GCCGAAGACA TCGACGATCT GGATACGCTG
GAACAACTCA AGGATCTCGG GATCGATTAC GCGCAGGGCA AGGCCATCGC GCCCAACGAG
CCCTTCGAAG TCTGGTTTGA AGGCGCTGTC ATGCGCTCAG GCTAG
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| Protein sequence | MNRLTLRHRL LLLTLLPSTL IAIALVTYFT FSGIKTLEGE LRLKGMATVR YLAPISEYGI
IAGQVEGLHG LAQATVQESG VKAAIVVNQK GRTIAVSGRV SLAADELRQI LSEPKQVAET
DQWIAFGAPV KRSMSDTDQL FETNAGKPAI PEVIGHVFVE FDKTELANKQ RQLLQRGLVI
VLLGLLVLAA MAIAMADNLA KPVMRLVQAV KDMSSGRLDT RVPASSSGEL GVLENGFNEM
AAKIEEVHHS MQTRIEEATA QLAFQARHDA LTGLLNRREF EHRLEKALAS VQAGGDEFAI
LFLDLDRFKQ VNDTCGYLAG DELLRQMALL FQGRLREEDT LARLGGDEFS IMLANCTGAR
ALQVADDICG LAAAYRFIWQ DKVFAIGASV GITTVNRKVR NINEILAAGD AACHRAKESG
RNRVCEQEVT FNQERRHEAS NWASRIANAL SEDRLLVEAV PLRALQHAAS GHVVELTARL
NEPGQPPVAL AALIDAAERY DLAPAIDRRL IDTAIAAQAR AKRQHRNLYC LVPLSRSSIS
SRETIDYIAR SLSSQNMAGN KLCFMFSEDI LTHLTSQAME FSRQVHTLGC QIGLDDFGGG
LSSFSHLRSI TPSHVKLSRS LTRDLGGNRA STALLRAVQE ITADQHIRSI AEDIDDLDTL
EQLKDLGIDY AQGKAIAPNE PFEVWFEGAV MRSG
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