Gene Daro_0115 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0115 
Symbol 
ID3569960 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp131946 
End bp132881 
Gene Length936 bp 
Protein Length311 aa 
Translation table11 
GC content60% 
IMG OID637678550 
Productrod shape-determining protein MreC 
Protein accessionYP_283344 
Protein GI71905757 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1792] Cell shape-determining protein 
TIGRFAM ID[TIGR00219] rod shape-determining protein MreC 


Plasmid Coverage information

Num covering plasmid clones68 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCCGGCC TCGACCACGC GCCTCCACCG TTCTTCAAGC GAGGGCCAGC ACCGCTGGCC 
CTTCTGACTT TCTACATCGC CGTTTCATTG GCGATTTTTG TGCTCGACCT GCGCTTCAAG
AGCCTTGAAT TACTGCGCCA GAGCATCGCT CTGGTCATCG ACCCGGTGCA GCGCGTTGCC
CAGACACCGG GTAGCCTGGT CGACTACGCG GCCAGTTATC TGCAAGGCCT GCGCGCCCTG
CAACTAGAAA ATGGCGAGCT AAAACACAAT CAGCTGACAA CCGCGCCCAA TCTGCAGCGC
TTGGCCCAAC TCGAAGTTGA GAATGAGCGG TTGCGCAAGC TGCTGGCGGT CAAGGAACGC
GAAAAGGCCA ACGGTCAGGT TACCCAGATT CTGTACACTG CCCGCGACCC GTTCTCGCGC
AAGGTCATTG TGGACAAAGG CCAGCAGGCT GGTATTGTCG CCGGGCAACC CGCCATTGAT
GAGGCCGGGG TAGTCGGTCA GGTTACCCGC GTTTTCCCGT TCTCGGCTGA AATCACCCTG
ATTACCGACA AGGATCAGGT CGTGCCGGTC CAGGTTGTGC GTAGTGGCCA GCGCTCAGTC
GTTTTCGGCC TCGGCAACGG CCAGCTGGAA TTGCGTTACA TGCCCGCCAA CGCCGACATC
CAGATTGGCG ATATTCTGGT CACCTCCGGA CTGGACGGCA TCTACCTGGC CGGCTTCCCG
GTCGCCAAGG TCGTCGATAT CGAGCGCGAC AGCGCCTATT CCTTCGCCCG TATCTTCTGC
GTACCCATTG CTGGCGTCGA AAATTTTGGC GAAGTGATGG TGCTTGACCC GCGCAAGGCG
CTGCCGCCGG CACCGCCAGA GTCATCCGGA CGTCCGGGCA GTTCCGACAA ACCAAGCCTG
CGCAAGAAAA AGAAAACCGC TGGAAAAGAA CACTGA
 
Protein sequence
MAGLDHAPPP FFKRGPAPLA LLTFYIAVSL AIFVLDLRFK SLELLRQSIA LVIDPVQRVA 
QTPGSLVDYA ASYLQGLRAL QLENGELKHN QLTTAPNLQR LAQLEVENER LRKLLAVKER
EKANGQVTQI LYTARDPFSR KVIVDKGQQA GIVAGQPAID EAGVVGQVTR VFPFSAEITL
ITDKDQVVPV QVVRSGQRSV VFGLGNGQLE LRYMPANADI QIGDILVTSG LDGIYLAGFP
VAKVVDIERD SAYSFARIFC VPIAGVENFG EVMVLDPRKA LPPAPPESSG RPGSSDKPSL
RKKKKTAGKE H