Gene Daro_0075 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0075 
Symbol 
ID3569714 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp92156 
End bp93958 
Gene Length1803 bp 
Protein Length600 aa 
Translation table11 
GC content66% 
IMG OID637678510 
Productallophanate hydrolase 
Protein accessionYP_283304 
Protein GI71905717 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0154] Asp-tRNAAsn/Glu-tRNAGln amidotransferase A subunit and related amidases 
TIGRFAM ID[TIGR02713] allophanate hydrolase 


Plasmid Coverage information

Num covering plasmid clones58 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTCCCG CCCAACTCGA TTTCGCCAGC CTGGCCGCCG CCTACCGGGC CGGCCTGAAA 
CCGCGTGACC TGTTCCGCCA CCTGTTGCGC CTTGCACAGG ACGACACCCA CCAAGCCTGG
ATCAGCCTGT TGCCTGAGGA GCGCCTGCTC GCCCTGGCCG ATGCGCTGGA AGGCCGCGAT
CCGGCGACTT TGCCGCTTTA TGGCATTCCC TTTGCCGTCA AGGACAACAT TGATCTCGAT
GCAATGCCGA CGACGGCCGG CTGTCCTGAC TATGCCTACT TGCCAGGCGA AAGCGCCGTG
GTCGTTGCCA AATTGATGGC GGCCGGGGCG ATCCCCCTTG GCAAGACCAA CCTCGACCAG
TTCGCCACTG GCTTGAACGG CACGCGATCG CCTTTTGGCG CTTGCCGCAA TGCCTTCGAC
CCGGCCTATA TCTCTGGTGG TTCCAGTTCC GGTTCGGCGG TCGCGGTGGC GCTCGGCCAG
GTCAGCTTCG CGCTGGGTAC CGACACGGCC GGTTCTGGGC GGGTGCCGGC GGCTTTCAAT
AATCTGGTTG GCCTGAAACC GAGTTGCGGC CTGCTATCGT CGCGCGGAGT CGTGCCGGCC
TGCCGTTCGC TCGATACGGT GTCGATCTTC ACCCTGAGTG CCGGGGATGC GGCCAAGGTC
TTTGCTGCCG CCGCCGGCTA CGATGCCGCC GATCCCTTCA GCCGGCCGCT GCAGCCGCAT
GGCCGTGGCT TTCCGGCCGG CGATGCCTTC CGTTTTGGCG TGCCGCGGGA CGATCAACTG
GCCTTCTTCG GCGATACCAT CAATCCCGCC CTGTTCGCGG CCGCCGTTGC CCGTCTGGAG
CGACTTGGCG GGCAGCGCTG CGAGATCGAT TTCGCGCCCT TCCTCGAAAC GGCTCGTCTG
CTCTACGGCG GCCCCTGGGT GGCCGAGCGC TATCACGCGA TCAAGGATTT CATCGAGCGC
CAGCCTGAAT CACTCTTCCC GGTGACCCGC GAGATCACGC TGGCCGGCGG GCGGGCAACG
GCGGTCGAGG CTTTCGCTGC CGCCTATCGA CTGCGCGAAC TGAAGCGAAG CTGCGATGCC
GTGTGGTCCG ATCTGGATCT GATCATCACG CCGACCGCCG GCTTCCACCC GACCATTGCT
GCGGTCGAGG CCGACCCGAT CCGCCTGAAC AGTGATCTCG GCTACTACAC CAATTTCATG
AACCTGCTCG ACTACTCGGC GGTGGCCGTG CCGGCTGCCT TCCGGCCGGA CGGGCTACCC
TTTGGCGTGA CCCTGTTCGC CCCGGCGCAT CAGGATATCC CGTTGCTCGA ACTGGCGGCG
CGCTGGCAGG CGGACAGCGC CCTGCCACTG GGCACCTCGG AGGGAACGGC AAAGGTGGCG
GCCGGGCTGG ATGTCGATCC GACGGCCGGT GGCCGCGTTC GTGTCGCTGT GTGCGGGGCA
CACCTGTCGG GGCTACCGCT CAACTGGCAG CTGACGCAGC GCGGGGGGCG CCTGATCTCG
GTCTGCCGCT CGGCACCGGA CTACTGTTTC TACGCACTGG CCGGCGGGCC GCCGTTGCGT
CCGGGCATGG TCCGGGTCAA TGAAGGCGGC AGCGCCATCG ACATGGAGGT CTGGGAATTG
CCGAGCGAGC GCTTCGGCGA TTTCGTCGCC GGTATCCCGG CACCGCTGGG CATCGGCAAA
GTACGCCTCG AAGACGGCAG TGAGGTCTGC GGCTTCATCT GCGAGGGGGC TGCCGTGGCC
AGCGCCGAGG ATATTACGGC CTTCGGTGGC TGGCGGGCCT GGCTGGCCAG CCGGAATTCC
TGA
 
Protein sequence
MIPAQLDFAS LAAAYRAGLK PRDLFRHLLR LAQDDTHQAW ISLLPEERLL ALADALEGRD 
PATLPLYGIP FAVKDNIDLD AMPTTAGCPD YAYLPGESAV VVAKLMAAGA IPLGKTNLDQ
FATGLNGTRS PFGACRNAFD PAYISGGSSS GSAVAVALGQ VSFALGTDTA GSGRVPAAFN
NLVGLKPSCG LLSSRGVVPA CRSLDTVSIF TLSAGDAAKV FAAAAGYDAA DPFSRPLQPH
GRGFPAGDAF RFGVPRDDQL AFFGDTINPA LFAAAVARLE RLGGQRCEID FAPFLETARL
LYGGPWVAER YHAIKDFIER QPESLFPVTR EITLAGGRAT AVEAFAAAYR LRELKRSCDA
VWSDLDLIIT PTAGFHPTIA AVEADPIRLN SDLGYYTNFM NLLDYSAVAV PAAFRPDGLP
FGVTLFAPAH QDIPLLELAA RWQADSALPL GTSEGTAKVA AGLDVDPTAG GRVRVAVCGA
HLSGLPLNWQ LTQRGGRLIS VCRSAPDYCF YALAGGPPLR PGMVRVNEGG SAIDMEVWEL
PSERFGDFVA GIPAPLGIGK VRLEDGSEVC GFICEGAAVA SAEDITAFGG WRAWLASRNS