Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0033 |
Symbol | |
ID | 3567795 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 38532 |
End bp | 40532 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 637678462 |
Product | replication restart DNA helicase PriA |
Protein accession | YP_283262 |
Protein GI | 71905675 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1198] Primosomal protein N' (replication factor Y) - superfamily II helicase |
TIGRFAM ID | [TIGR00595] primosomal protein N' |
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Plasmid Coverage information |
Num covering plasmid clones | 33 |
Plasmid unclonability p-value | 0.101123 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 16 |
Fosmid unclonability p-value | 0.886692 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTCAGCCG CTAAATCCAT GCAAGTTTTG CGCGTTGCTC TCGATTTGCC GCTCCATCGA CTTTTTGATT ATGTCGTCGA GTCGGCGTCG ACTGAGGATA TCGGCTTGCG CGTCCGGGTG CCTTTCGGCC GTGGCGAAAA ACTTGGGGTG ATTGTCGAAG TGCTGGCCGA AAGCGACTGG CCACTCGAAC AGCTGAAACC GGCAATTGAA GTGCTGCGCG ATCTGCCGCC TTTGCCAGGC GATTTCTTCA GGCTTTGCCG GTTTGCCAGT GCTTACTATC AGGCGGCGCT TGGTGAAGTG ATCATGCAGG CCCTGCCGAT CGGCCTCAAG CGCCTTGATC CGCCAACCCG TCGCAATGCC CGGGCGAGCC GTTCGTCGGT CGCAATAGCG CCACCCGCCC TGACCGAAGA GCAAACCATC GCCGTGGCTG CGGTGGATCC AGCGGCCGGG TTTTCGGCCC ATCTGTTGCA TGGGGTGACG GGCAGCGGCA AGACCGAGGT TTACCTGCGT CTGATAGAAA GAGCGCAGGC CGATGGCAAG CAGGTCTTGC TGCTGGTGCC GGAAATCAAC CTGACGCCGC AGCTCGAGGG ACGGGTGCGA TCCCGGTTTC CTGAGGCGGG AGTGGTTTCC CTGCATAGCG AACTGGCCGA GGCGGCGCGT GAGCGGAACT GGCGGGCTGC CTTTTCCGGC GAGGCGAGCA TTGTGCTCGG GACCCGCCTG TCGATCTTCA CGCCCATGCC GCGTCTTGGC CTGATTGTCG TCGATGAGGA ACACGATGCT TCGTTCAAGC AACAGGACGG CATGCGCTAC TCGGCGCGCG ATGTCGCGGT GTTTCGCGCC CACCAGCTAG GCATTCCTGT GCTGCTCGGT TCAGCGACCC CGTCGCTGGA AACCTGGGCC AATGCCCAGA GCAAGCGCTA TAACCTGATC ACCCTGCTCG AACGGGCCAA CCCGGAAGCA TCGTTGCCGG CTATCCATAT CCTCGACACC CGCAAGATGG TGCTGCAGGA GGGCGTCGGT GAGCCGCTGA TTGCCGCGAT TAAGGAGCGC CTGGCCCGTG GTGAGCAGAG CCTGGTCTTC CTGAATCGCC GGGGGTATTC GCCGGTGCTG GCCTGCCCGG CCTGCGGCTG GGTGTCACGC TGCACGCGTT GTGCCGCCAA TATGGTGCTG CATCTGGCTG ATAAGCGGCT ACGTTGCCAT CACTGCGGTT GCGAGCATCG TATTCCCAAA GCCTGCCCGA CCTGCGGTAA CCAGGATATC CATCCCTTCG GGCGCGGCAC GCAGCGGCTG GAAGGCTGGT TGCAGGAAGC CTTTCCTGAG GCCCGCGTGC TCCGGGTCGA CCGTGACTCG GTGAAGAGCC GCAAGCAATG GGAGGTGATG CTCGACCGCA TCCACGGTGG TGAGGCCGAC ATTCTGGTCG GCACGCAGAT GCTGGCCAAG GGGCATGACT TCCCCAAACT GACGCTGGTC GGCGTGCTGG GGGCCGATTC AGCACTGTTT GCCGCTGACT GGCGGGCTCC GGAGCGCCTG TTTGCCCAGT TGATGCAGGT CGCCGGGCGA GCCGGGCGGG CCGAACTGAA GGGCGAGGTG CAGATCCAGA CGCAATACCC GGATCACCCC CTGTTCGCCT CGCTGGTCAA ACACGACTAT CCGGGTTTTG CCGCCCTGCA GCTCAAGGAG CGCGAACAAG CCGGCTTCCC GCCCTATGCC TTCCAGGCCG TCTTGCGCGC CGAGGCGCCG GAAATGGCTG ATGCCATCGC CTTCCTGAAG ACCGCCGCCG CCATGCCGCT GATCGGCGAA CACGAGAACA TCATGATCTA CGACCCGGTG CCGATGAAGC TGGCCCGGCT GGCCAATCTG GAGCGTGGCC AATTGCTGGC CGAGTCGTAT TCCCGCCCGG CGCTACAGGT CTTTCTGCCG CTCTGGCGCG AAGCCATCGA GGGCATCAAG GCGCCGTCCA AACTGCGCTG GCACATCGAG GTCGATCCAC TGGAGTTCTG A
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Protein sequence | MSAAKSMQVL RVALDLPLHR LFDYVVESAS TEDIGLRVRV PFGRGEKLGV IVEVLAESDW PLEQLKPAIE VLRDLPPLPG DFFRLCRFAS AYYQAALGEV IMQALPIGLK RLDPPTRRNA RASRSSVAIA PPALTEEQTI AVAAVDPAAG FSAHLLHGVT GSGKTEVYLR LIERAQADGK QVLLLVPEIN LTPQLEGRVR SRFPEAGVVS LHSELAEAAR ERNWRAAFSG EASIVLGTRL SIFTPMPRLG LIVVDEEHDA SFKQQDGMRY SARDVAVFRA HQLGIPVLLG SATPSLETWA NAQSKRYNLI TLLERANPEA SLPAIHILDT RKMVLQEGVG EPLIAAIKER LARGEQSLVF LNRRGYSPVL ACPACGWVSR CTRCAANMVL HLADKRLRCH HCGCEHRIPK ACPTCGNQDI HPFGRGTQRL EGWLQEAFPE ARVLRVDRDS VKSRKQWEVM LDRIHGGEAD ILVGTQMLAK GHDFPKLTLV GVLGADSALF AADWRAPERL FAQLMQVAGR AGRAELKGEV QIQTQYPDHP LFASLVKHDY PGFAALQLKE REQAGFPPYA FQAVLRAEAP EMADAIAFLK TAAAMPLIGE HENIMIYDPV PMKLARLANL ERGQLLAESY SRPALQVFLP LWREAIEGIK APSKLRWHIE VDPLEF
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