Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daro_0032 |
Symbol | hemE |
ID | 3567794 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dechloromonas aromatica RCB |
Kingdom | Bacteria |
Replicon accession | NC_007298 |
Strand | + |
Start bp | 37182 |
End bp | 38249 |
Gene Length | 1068 bp |
Protein Length | 355 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 637678461 |
Product | uroporphyrinogen decarboxylase |
Protein accession | YP_283261 |
Protein GI | 71905674 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0407] Uroporphyrinogen-III decarboxylase |
TIGRFAM ID | [TIGR01464] uroporphyrinogen decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 52 |
Plasmid unclonability p-value | 0.590696 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCCGAC CCAAGAACGA TACTTTCCTG CGTGCCCTTC TCAAAGAGCC GACCGAATAC ACACCGCTGT GGCTGATGCG CCAAGCGGGG CGTTATCTGC CCGAGTACTG CGAAACCCGT AAACGGGCTG GCAATTTCCT GAATTTGTGC AAATCGCCGA CGATGGCCTG CGAGGTCACG CTGCAGCCGT TGGCCCGCTA CGACCTCGAT GCCGCCATCC TGTTCTCCGA CATCCTGACC GTGCCCGATG CAATGGGGCT TGGGCTGTAT TTCGCCGAAG GCGAGGGCCC CAAGTTCGAG CGCCCGCTGC GCGAAGAATG GGCGATCAAC AACCTGACGG TGACCGATCC CTATGAGCAT CTTGGCTACG TGATGGATGC CGTGTCAGAG ATTCGTCGTG CGCTGGACAA CTCCGTTCCG CTGATCGGCT TCTCCGGCAG CCCCTACACG CTGGCCTGTT ACATGGTCGA AGGCGAGGGC TCCAGCGATT TCCGCAACAT CAAGGCCATG CTCTACAACC GGCCGGACCT GCTGCACCGC ATCCTGTCGG TGACCGCTGA TTCCGTGATC GCCTATCTGA ATGCCCAGAT CGATAGCGGT GCGCAAGCGG TGATGATCTT CGATACCTGG GGAGGCTCGC TGTCCAATGC CGCCTACGAG GAGTTCTCGC TGCAATACAT GCGTCGCATC GTGGCTGGCC TGAAGAAGGA AAAGGACGGT CAGCGCATTC CGAGCATCGT GTTCACCAAG AACGGTGGTC TGTGGCTGGA AAAGATTGCC GATATCGGCT GCGATGCTGT TGGCCTCGAC TGGACGATCG ACATTGGCGA AGCTCGCCGT CGCGTCGGTG ACAAAGTGGC TTTGCAGGGC AACCTGGATC CGAACGTCTT GTTTGCTCAG CCGGAAATCG TTGCTGCCGA AGCGAAAAAA GTGCTCGACA GCTTTGGCCC GGCCAATACT GGCCACGTTT TCAACCTCGG CCACGGCATT TCGCAATTCA CACCACCGGA AAGCGTGACT GCGCTGGTTG AAGCGGTTCA TTCGCACAGT CGGCTATCAC GTAAGTGA
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Protein sequence | MSRPKNDTFL RALLKEPTEY TPLWLMRQAG RYLPEYCETR KRAGNFLNLC KSPTMACEVT LQPLARYDLD AAILFSDILT VPDAMGLGLY FAEGEGPKFE RPLREEWAIN NLTVTDPYEH LGYVMDAVSE IRRALDNSVP LIGFSGSPYT LACYMVEGEG SSDFRNIKAM LYNRPDLLHR ILSVTADSVI AYLNAQIDSG AQAVMIFDTW GGSLSNAAYE EFSLQYMRRI VAGLKKEKDG QRIPSIVFTK NGGLWLEKIA DIGCDAVGLD WTIDIGEARR RVGDKVALQG NLDPNVLFAQ PEIVAAEAKK VLDSFGPANT GHVFNLGHGI SQFTPPESVT ALVEAVHSHS RLSRK
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