Gene Daro_0012 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaro_0012 
Symbol 
ID3570036 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDechloromonas aromatica RCB 
KingdomBacteria 
Replicon accessionNC_007298 
Strand
Start bp16355 
End bp17488 
Gene Length1134 bp 
Protein Length377 aa 
Translation table11 
GC content60% 
IMG OID637678441 
Productresponse regulator receiver 
Protein accessionYP_283241 
Protein GI71905654 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones71 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.0552217 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCCCACC GTTTTCGCGT TGCCATTGTC GAGGACAATC CGCCCCAGCG CATGATACTG 
ACCCGCCTGC TGGAGAAGGA TTACCAGATC GAATCGTTCG AAAGTGGCCC GATTTTCCTG
GCGAGTGATG GTCTTTTCGA CGCCGTACTG CTCGACATCG AAATGCCTGA ACTCAGCGGC
TATGACACCT GCCGGCGCTT CCGGGAACAG ACGCGCGGCG CCGATGTGCC GGTCATTTTC
GTTTCTGCCC ACGACACCAC ACCGGAGCGT GTCGCCTCCT ACGACGCGGG TGGCGACGAT
TTCCTGACCA AACCGATCGC CGCGCACGAA TTGCGTCACA AATTGGGCAA CGCCATCGAG
TTGCGGGAAA AGGTCCGCAC CCTGTCCAGC CAGACGACCG ATGCGCAACG CGTTGCCTTC
ACCGCCATGA CCAGCATGGG CGACCTCGGA GTGGTCATCG AATTCCTGCG CAAATCGGCC
CAGGCCACCA CCTATTCGGC CATTGCCGCC CGCCTGGTCG CAGCGATGAA AGCCTGGGGC
CTGCAAGGCG CTGTTCAAGT CCGTGGCCGG CATGAACAGG TAGCGCTAAA TGCCGAGGGA
CCCATGACGG CCATGCAGGC GGCCGTGTTG GAAAAACTGC GCGATATCGG ACGTATTTTC
GAAATGGGTT CGCGTGCCGT GATCAATTTC GACCACGTTT CCCTGCTGGT TGAAAACCTG
CCGGTAGACG ACCCGAACAA GGTCGGCCGC CTGCGTGATC ATCTCGCCGT CCTGGCCGAA
AGCGCCGACA TGCGTATGGC CGCGCTGGAT TCCGCCATCG AACGCGACCT GCAGAAACAG
GGCATCGAAG CTGCTCTGGA CGAACTCCGG GCAGCCATGC AGCAGGCAAC GCATCATTCC
GCCACCAGTC ACCCGAGACA GCAGGCAACC ATGCTCGAAT CCATCGAACA ACTGGGCAGG
ACCACTCATA CCCTCGGGCT GACCGCCGTT CAAGTGGAGT ATCTCGATGA TCTGATCCGC
CACATTCTGG AGGAATCCCA GCATTACTTC GACGACGTCG CGCAAAGCGA AAGCGACTTC
GCCGATGTGT TCAGCCGCCT GGAACGCCTC GCACAAGCCG ACTACCGGCT ATAG
 
Protein sequence
MPHRFRVAIV EDNPPQRMIL TRLLEKDYQI ESFESGPIFL ASDGLFDAVL LDIEMPELSG 
YDTCRRFREQ TRGADVPVIF VSAHDTTPER VASYDAGGDD FLTKPIAAHE LRHKLGNAIE
LREKVRTLSS QTTDAQRVAF TAMTSMGDLG VVIEFLRKSA QATTYSAIAA RLVAAMKAWG
LQGAVQVRGR HEQVALNAEG PMTAMQAAVL EKLRDIGRIF EMGSRAVINF DHVSLLVENL
PVDDPNKVGR LRDHLAVLAE SADMRMAALD SAIERDLQKQ GIEAALDELR AAMQQATHHS
ATSHPRQQAT MLESIEQLGR TTHTLGLTAV QVEYLDDLIR HILEESQHYF DDVAQSESDF
ADVFSRLERL AQADYRL