Gene Daci_6007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_6007 
Symbol 
ID5751638 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand
Start bp6712531 
End bp6713367 
Gene Length837 bp 
Protein Length278 aa 
Translation table11 
GC content68% 
IMG OID641301149 
Productdihydrodipicolinate reductase 
Protein accessionYP_001567020 
Protein GI160901438 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0289] Dihydrodipicolinate reductase 
TIGRFAM ID[TIGR00036] dihydrodipicolinate reductase 


Plasmid Coverage information

Num covering plasmid clones39 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones34 
Fosmid unclonability p-value0.850549 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCCA CGACTGCCAC TTCCTCCAGC AACAACCAGC GCCTGCGTGT GGCCGTGGCC 
GGCGCCTCCG GCCGCATGGG CCGCATGCTG ATCGAGGCCA TCGCGCAAAG CGATGACCTT
GCGCTGGCCG CCGCGCTGGA CCGCGCCGAC AGCCCTTCGC TGGGCACCGA TCCCTCGGCC
TTCCTGGGCC AGCCCAGCGG CATTGCCATC GAAAGCGATG TGCGTGCCGC GCTGTCCAAG
GCCGATTGCC TGATCGACTT CACGCGCCCC GAAGGCACGA TGGACCACCT GGCCATCTGC
GCCGAGCTGG GCGTCAAGCT GGTCATCGGC ACCACGGGCT TCAGCGACGA GGAAAAGGCC
CGCATCGCCG AGTACGCCCA GCGCACGGCC GTGGTGCTGT CGCCCAACAT GAGCGTGGGC
GTGAACGTCA CCTTCAAGCT GTTGGAGATG GCGGCCAAGG CGCTGTCCAG CGGCTATGAC
ATCGAAATCG TCGAGGCCCA CCACCGCCAC AAGGTCGATG CCCCCTCGGG CACGGCCCTC
AAGATGGGCG AGGTCATCGC CGAAGCCCAG GGCACGAAGC TGGCCGACCG CGCCGTCTAC
GAGCGCTTCG GCCACACCGG CGCGCGCGAG GACAACACCA TCGGCTTTGC CACCGTGCGC
GGCGGCGACA TCATCGGCGA CCACACGGTG CTGTTCGCGG GCACGGGCGA GCGCATCGAG
ATCTCGCACA AGTCCAGCAG CCGTGCCGGC TATGCGCAGG GCAGCCTGCG GGCGGCGCGC
TTCCTGGCTG GCAAGGCAAC GGGCCAGTAC GACATGAACG ATGTCCTGGG TCTGTGA
 
Protein sequence
MNATTATSSS NNQRLRVAVA GASGRMGRML IEAIAQSDDL ALAAALDRAD SPSLGTDPSA 
FLGQPSGIAI ESDVRAALSK ADCLIDFTRP EGTMDHLAIC AELGVKLVIG TTGFSDEEKA
RIAEYAQRTA VVLSPNMSVG VNVTFKLLEM AAKALSSGYD IEIVEAHHRH KVDAPSGTAL
KMGEVIAEAQ GTKLADRAVY ERFGHTGARE DNTIGFATVR GGDIIGDHTV LFAGTGERIE
ISHKSSSRAG YAQGSLRAAR FLAGKATGQY DMNDVLGL