| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5986 |
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| Symbol | |
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| ID | 5751607 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6675903 |
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| End bp | 6676565 |
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| Gene Length | 663 bp |
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| Protein Length | 220 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 641301118 |
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| Product | short chain dehydrogenase |
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| Protein accession | YP_001566999 |
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| Protein GI | 160901417 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.0076717 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAGTCA CTCTGGTGTT GGGAGCCTCG CGCGGGCTTG GTTTTGCCTT GGTGCAGGCC
TATGCGGCCC AGGGCCGCAG CGTGGTCGCC ACGGTGCGCA GCGAGGCCGA CCGCGAGCGC
GTCGAGGCCA CGGGCGCCAA GGTGCTGCTG GTGGATGTGG CCGACCCGGC CAGCGTCAGC
GGCCTGGCCT GGCAGCTCGA CGGCGAGAAG ATCGAGCTGG CGCTGTACGT GGCCGGAGTG
TGGGATGCCC ACAGCTCGGC CACGCCGCCC ACGCGCGAGC AGTTCGACCG CGTCATGCAC
ACCAATGTGC TGGGCGCCAT GCAGGTGCTG CCCCAGGTGG CGCCGCTGGT CGAGGCGGCG
GGCGGCGTGT TCGGCCTGTT CTCCAGCCAG ATGTCGCTGC TGGCCGATGC CGAATCCGAC
GCCTGGCTCT ACCGCGTCAG CAAGGCTGCG CTCAACATGG TCGTGGCCAG CGCCCAGCCG
CAATGGCCGG GCGCCACCGT GGTCGCGCTG GACCCGGGCT GGGTGCAGAC CGACATGGGT
GGCGCGGCTG CCACCTTCAC CGTGGAGCAA AGCGTGCAGG GCCTGGTGCG CACGCTGGCC
GGCGTCACGC CGGCCGACCG GGGCCGCATG CTGCGCCACG ACGGGCAGCG CATCGCCTGG
TAG
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| Protein sequence | MAVTLVLGAS RGLGFALVQA YAAQGRSVVA TVRSEADRER VEATGAKVLL VDVADPASVS
GLAWQLDGEK IELALYVAGV WDAHSSATPP TREQFDRVMH TNVLGAMQVL PQVAPLVEAA
GGVFGLFSSQ MSLLADAESD AWLYRVSKAA LNMVVASAQP QWPGATVVAL DPGWVQTDMG
GAAATFTVEQ SVQGLVRTLA GVTPADRGRM LRHDGQRIAW
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