| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5978 |
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| Symbol | |
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| ID | 5751599 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Delftia acidovorans SPH-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010002 |
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| Strand | - |
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| Start bp | 6668091 |
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| End bp | 6668783 |
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| Gene Length | 693 bp |
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| Protein Length | 230 aa |
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| Translation table | 11 |
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| GC content | 70% |
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| IMG OID | 641301110 |
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| Product | HAD family hydrolase |
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| Protein accession | YP_001566991 |
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| Protein GI | 160901409 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0637] Predicted phosphatase/phosphohexomutase |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 0.367832 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACTGCTT TCGAGGCCGT GCTCTTCGAC TGTGACGGCG TGCTCGTCGA CAGTGAATCC
ATCACCAACC GCGTGCTGTG CACCATGCTC AATGAATCGG GCTGGCCCAT CAGCACCGAG
GAATGCCTGC GCGAATTCAT CGGCAAGACC GTGCGCAGCC AGGCCGCGCT GATCGAGGCG
CGCACCGGCA AGCCGCTGAC CGACGCATGG ATGGCCGCCT TCTACGAGCG CCGCAACGCC
GCGCTGCGCG CCGAGCTGGT GGCCATTGAC GGCGCGCTGT CCGCCGTCAG CGAGTCCCAT
GCGCTGTGCG CTGGCCGCAT CGCCTGCGCC TCGGGCGCGG ACCGCGCCAA GGTGGAGATG
CAGCTGGCCC AGGTCGGCAT GGCCCCTTAT TTCGAGGGCC GCGTCTTCAG CGGCCATGAG
CTGCCGCGCA GCAAGCCCTT TCCCGATGTG TACCTGGCCG CCGCCGCCGC CCTGGGCGTG
GAGCCGGCGC GCTGCCTGGT CATCGAGGAC ACTGTGACCG GCGTCACCGC CGGCGTGGCC
GCAGGCGCCA CGGTCTGGGG CTACTTCCCG GCCGACCAGG GCCATGCCTC GGCCGAGCAA
CTGCTCGAAG CCGGCGCCAG CTGCGTGTTC GGCGACATGG GCGAGCTGCC TGCCATGCTG
CGCGCCATCG GGCAGGCCAG CGCCAGCGCT TGA
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| Protein sequence | MTAFEAVLFD CDGVLVDSES ITNRVLCTML NESGWPISTE ECLREFIGKT VRSQAALIEA
RTGKPLTDAW MAAFYERRNA ALRAELVAID GALSAVSESH ALCAGRIACA SGADRAKVEM
QLAQVGMAPY FEGRVFSGHE LPRSKPFPDV YLAAAAALGV EPARCLVIED TVTGVTAGVA
AGATVWGYFP ADQGHASAEQ LLEAGASCVF GDMGELPAML RAIGQASASA
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