Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5975 |
Symbol | |
ID | 5751596 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6664381 |
End bp | 6666099 |
Gene Length | 1719 bp |
Protein Length | 572 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 641301107 |
Product | AMP-binding domain protein |
Protein accession | YP_001566988 |
Protein GI | 160901406 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 37 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCCCGCCC AGAACGCCCC GCTCGCTTCC AGCCATGCCC AAGGCCGCAC CGATGTGCCG CTGATCGAGC AGACCATCGG CGATTTCTTT GCCGACATGG CGGCCCGCCA GCCTGATCGC GAGGCCCTGG TCAGCCGCCA CCAGGGCCTG CGCTACAGCT ATGCCGGCCT GCACACCGAG GCGCGCCGCC TGGCCAGCGC GCTGCTGGGC CTGGGGCTGG ACAAGGGCGA CCGCGTCGGC ATCTGGTCGC ACAACAACGC CGAATGGGTG CTGATGCAGC TGGCCACGGC CCAGGTCGGC CTGGTGCTGG TGAACATCAA CCCGGCCTAC CGCACCTCCG AGGTGGAGTA CGCGCTCAAC AAGGTCGGCT GCAAGGCGCT GGTGACCATG GCGCAGTTCA AGACCAGCGA CTACCTGGGC ATGCTGTGTG AACTGGCCCC CGAGCTGGCC ACGGCCGAGC CCGGCCGCCT GCATTGCGCG CGCCTGCCCC AGCTGCGCAG CGTGGTCTGG ATCGACGTCG CAGGGCAGGG CGAAGAGCAG CCCGGCATGC TGCGCTTTTC CAGCCTGCTG GCGCGCGGTG ATGCGCAGGA TGCGCGCATC GACGCCGTGG CCGCCACGCT CAAGAACACC GACCCCATCA ACATCCAGTT CACCAGCGGC ACGACGGGCT TTCCCAAGGG CGCCACGCTG ACCCACCGCA ACATCCTGAA CAACGGCTTT TTCATCGGCG AGTGCATGCG GCTGACGCCC GAGGACCGGC TGTGCATTCC CGTGCCGCTG TACCACTGCT TCGGCATGGT GCTGGGCAAC CTGGCCTGCT TCACGCATGG CTCGGCCATC GTCTACCCGA ATGACGGATT CGATCCGCTG CTGGTGCTGG AGACCGTGCA GGCCGAGCGC TGCACGGGCC TGCACGGCGT GCCCACCATG TTCATCGCCG AGCTGGACCA CCCGCGCTTC AAGGAGTTCG ACCTGAGCAC GCTGCGCACC GGCATCATGG CCGGCTCGCC CTGCCCCATC GAGGTGATGA AGCGCGTGGT CAGCGACATG CACCTGTCCG AGATCACCAT CGCCTACGGC ATGACCGAGA CCAGCCCCGT CAGCTGCCAG AGCGATGCCG ACACGCCGCT TCAGCGCCGC GTGTCCACCG TGGGCAAGGT GCAGCCGCAT CTGGAAGTGA AGATCGTCGA CCCGGCCACG GGCGAGGTCG TGGCGCCCGG CGTCTCGGGC GAGCTGTGCA CGCGCGGCTA CTCGGTCATG CATGGCTACT GGGGGGACGA GGCCCGCACG CGCGAGGCCA TCGACGACGA TGCCTGGATG CACACGGGCG ACCTGGCCAC CATGGATGAG CAGGGCTACG TGAACATCGT CGGCCGCATC AAGGACATGG TGATCCGCGG CGGCGAGAAC ATCTACCCGC GCGAGATCGA GGAATTCCTC TACCGCCATC CCCAGGTGCA GGACGTGCAG GTGGTCGGCG TGCCCGATGT GCGCTACGGC GAGGAGCTGT GCGCCTGGAT CATCGTCAAG CCCGGCCAGA CGCTGACCGA AGACGGCGTG CGCGACTTCT GCAAGGGCCA GATCGCCCAC TACAAGGTGC CGCGCTACAT CCGCTTCGTC GAGGCCTTCC CGATGACGGT GACCGGCAAG ATCCAGAAGT TCAAGATCCG CGACGAGATG ATCGCCATGC TGGATCTGCG TCCGGCCAGG ACCGCCTGA
|
Protein sequence | MPAQNAPLAS SHAQGRTDVP LIEQTIGDFF ADMAARQPDR EALVSRHQGL RYSYAGLHTE ARRLASALLG LGLDKGDRVG IWSHNNAEWV LMQLATAQVG LVLVNINPAY RTSEVEYALN KVGCKALVTM AQFKTSDYLG MLCELAPELA TAEPGRLHCA RLPQLRSVVW IDVAGQGEEQ PGMLRFSSLL ARGDAQDARI DAVAATLKNT DPINIQFTSG TTGFPKGATL THRNILNNGF FIGECMRLTP EDRLCIPVPL YHCFGMVLGN LACFTHGSAI VYPNDGFDPL LVLETVQAER CTGLHGVPTM FIAELDHPRF KEFDLSTLRT GIMAGSPCPI EVMKRVVSDM HLSEITIAYG MTETSPVSCQ SDADTPLQRR VSTVGKVQPH LEVKIVDPAT GEVVAPGVSG ELCTRGYSVM HGYWGDEART REAIDDDAWM HTGDLATMDE QGYVNIVGRI KDMVIRGGEN IYPREIEEFL YRHPQVQDVQ VVGVPDVRYG EELCAWIIVK PGQTLTEDGV RDFCKGQIAH YKVPRYIRFV EAFPMTVTGK IQKFKIRDEM IAMLDLRPAR TA
|
| |