Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5957 |
Symbol | |
ID | 5751578 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | + |
Start bp | 6644670 |
End bp | 6646403 |
Gene Length | 1734 bp |
Protein Length | 577 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 641301089 |
Product | SSS family solute/sodium (Na+) symporter |
Protein accession | YP_001566970 |
Protein GI | 160901388 |
COG category | [R] General function prediction only |
COG ID | [COG4147] Predicted symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 23 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 49 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGAATT CCGCACAACG CATGCTGCTG GCGCCCGCCG TGGCGCTGGC CCTGACGGGG CCCGTGCTGG CCGCCGGCGG CGATGTCGGC GTGGCCGCCA AGCAGGCCAC CAACTGGACC GCCATCATTC TCTTCACAGC CTTCGTCGTG GCCACGCTGT GGATCACCAA GTGGGCCGCG GGCCGCACCA AGTCGGCCGC CGACTTCTAT ACGGCCGGTG GCGGCATCAC GGGCTTTCAG AACGGCCTGG CGATTGCGGG CGACTACATG TCGGCCGCCT CCTTCCTGGG CATCTCGGCC TCGGTCATGG CCAGCGGCTA TGACGGCCTG ATCTACTCCA TCGGCTTCCT GGTGGGCTGG CCCATCCTGA CCTTCCTGCT GGCCGAGCGC CTGCGCAACC TGGGCAAGTT CACCTTCGCC GACGTGGCAG GCTACCGCTT CTCCCAGACG CCGTTCCGCG CCTTCGCGGC CAGCGGCACG CTGGTGGTGG TGGCCTTCTA CCTGATCGCG CAGATGGTGG GCGCGGGCCA GCTGATCAAG CTGCTGTTCG GCCTGGACTA CTGGATCGCC GTGGTGCTGG TGGGCGGCCT GATGATGATC TATGTGCTGT TCGGCGGCAT GACGGCCACG ACCTGGGTGC AGATCATCAA GGCCTGCATG CTGCTGGCCG GCGTGACCTT CATGGGCTTC ATGGTGCTGG CCAAGTACGG CTTCAGCCCC GAGGCACTGT TCGCCGAAGG CGTGCGCGTG CGCTCCGAGA TCGCTGCCAA CAACGGCGCC GACCCCTCGG CCGCGGCCAA GGCGGGCCTG GCCATCATGG GCCCGGGCGG CTTCATCAAG GACCCGATCT CGGCCATCAG CTTCGGCATG GCGCTGATGT TCGGCACGCT GGGCCTGCCC CACATCCTGA TGCGCTTCTT CACCGTGCCC GATGCCAAGG AAGCACGCAA GAGCGTGTTC TGGGCCACGA CCTGGATCGG CTACTTCTAC GTGCTGATCT TCATCATCGG CTTCGGCGCC ATCACCCTGG TGCTGACCAA CCCCGAGATG GCCGATACGG TCAAGGGCGT GATCCACGGC GGCGCGGGCA CGGCCAACAT GGCGGCCGTG CTGGTGGCCA AGAGCGTGGG CGGCGACGTG TTCTACGGCT TCATCTCGGC CGTGGCCTTC GCCACCATCC TGGCCGTGGT CGCGGGCCTG ACGCTGTCGG GCGCCTCGGC CGTGTCGCAT GACCTGTACG CCACCGTGAT CAAGAAGGGC AAGGCCGACA GCGCCGCCGA GCTGCGCGTC TCGCGCATCA CCACGCTGAC GCTGGGCGCC ATCGCCGTGC TGCTGGGCAT CGTGTTCGAG AAGCAGAACA TCGCCTTCAT GGTGTCGCTG GCCTTCGCGG TCGCGGCCTC GGCCAACTTC CCCCCGCTGC TGCTGTCGGT GCTGTGGAAG GACTGCACCA CCAAGGGCGC GGTGATCGGC GGCTTCATGG GCCTGATCTC CTCCGTGGGC CTGACCGTGG TCTCGCCCCC GGTGTGGGAG GCCACGCTGG GCAACCCCGC AGGCTCGGCC TGGTTCCCCT ACGCCTCGCC CGCGCTGTTC TCCATGACCA TCGGCTTCGT GGGCGTGTGG CTGTTCTCGG TGCTCGACAA GAGCGCCCAG GCTGCCAAGG AACGCGCCAT CTTCCCCGCG CAGCAGGTGC GCTCGGAAAC AGGCCTTGGC GCCTCGGGAG CTTCGGGCCA CTGA
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Protein sequence | MKNSAQRMLL APAVALALTG PVLAAGGDVG VAAKQATNWT AIILFTAFVV ATLWITKWAA GRTKSAADFY TAGGGITGFQ NGLAIAGDYM SAASFLGISA SVMASGYDGL IYSIGFLVGW PILTFLLAER LRNLGKFTFA DVAGYRFSQT PFRAFAASGT LVVVAFYLIA QMVGAGQLIK LLFGLDYWIA VVLVGGLMMI YVLFGGMTAT TWVQIIKACM LLAGVTFMGF MVLAKYGFSP EALFAEGVRV RSEIAANNGA DPSAAAKAGL AIMGPGGFIK DPISAISFGM ALMFGTLGLP HILMRFFTVP DAKEARKSVF WATTWIGYFY VLIFIIGFGA ITLVLTNPEM ADTVKGVIHG GAGTANMAAV LVAKSVGGDV FYGFISAVAF ATILAVVAGL TLSGASAVSH DLYATVIKKG KADSAAELRV SRITTLTLGA IAVLLGIVFE KQNIAFMVSL AFAVAASANF PPLLLSVLWK DCTTKGAVIG GFMGLISSVG LTVVSPPVWE ATLGNPAGSA WFPYASPALF SMTIGFVGVW LFSVLDKSAQ AAKERAIFPA QQVRSETGLG ASGASGH
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