| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Daci_5894 |
|---|
| Symbol | |
|---|
| ID | 5751515 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Delftia acidovorans SPH-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010002 |
|---|
| Strand | + |
|---|
| Start bp | 6552498 |
|---|
| End bp | 6553559 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 74% |
|---|
| IMG OID | 641301026 |
|---|
| Product | anti-FecI sigma factor, FecR |
|---|
| Protein accession | YP_001566907 |
|---|
| Protein GI | 160901325 |
|---|
| COG category | [P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG3712] Fe2+-dicitrate sensor, membrane component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 27 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 40 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGGCCT TGCCCTCGAA CAGCGACAGC GCCCTGGACG CGGCTGCACA TTCGCCCACC
CACACCACCA CCCCAGCCCA GGCACAGGCC CGCATCCGCC AGGAAGCGAT TGCCTGGTAC
GCGCGCCTGT GCTCCGGCGA TGCCACCGAC GCCGACCGTG CCGCCTGGCA GCGCTGGCAT
GAGGCCCACC CCGAGCACCA GCGCGCATGG CGGCATTTCG ACGCCCTGCA GTCCATGCTG
CAGCGCGTGC CGGGCCACCT GGCCGCCTCC ACGCTGCAGG CCAGCCGGCG CAGCCGCCGC
CGGGTGCTGC GCGGCATCGG CGCACTGGTG GGCAGCGGGG CCGTGGCGGG CCTGTCATGG
CAGCTGGCCG GCGGGCAGGG CGGCGTGCGC TCCTGGCTGG CCGACTACCG CACCGGCACG
GGCGAGCGCC GCACCGTCAC GCTGGCCGAC GGGTCCGAGC TGACGCTGAA CACGCGGACC
TCGGTGGATG TGTCCATGGA CCCCGTGCGC CGGCTGCTGG TGCTGCGCGA GGGCGAGATC
CTGGTGCAGA CCGCCCATTC CCTTTCCGGT CCCGGCGCGG GCGCCAAGGA TGGCCGCCCG
TTCATGGTGC ACACGCCGCA GGGCCGCATC CTGGCGCTGG GCACGCGCTT CACCGTGCGC
AGCCAGGGGG GCGCGGGCGG TGACACCGTG GTGAGCGTGC TGCAGGACGC CGTGGAAATC
CAGCCCCTGC AGGACCCCAG CCGCAGCCTG CGGCTGCAGG CCGGCCAGCA GGCCAACTTC
AGCCGCAACG GCATGCTGCC CGCCCAGGCC GCCGACCCGG CCCAGGTCAG CTGGGTGGGC
GGCAGCCTCA TCGTGGACGG CTGGCGGCTG GACGACGTGG TGCGCGAACT CGCACGCTAC
CGGCCCGGCC GCCTGGCCTG CGACCCGGCC GTGGCCGGCC TGCGCGTGTC CGGCGTGTTT
CCCCTGGCCG ACACGGACAA GGCGCTGGCT GTCATCACGC GCGCCTTCCC GGTGCGCGCG
GCCGGCCTGT CGCGCTACTG GCTGACCCTG GTGCCCGTCT AG
|
|---|
| Protein sequence | MTALPSNSDS ALDAAAHSPT HTTTPAQAQA RIRQEAIAWY ARLCSGDATD ADRAAWQRWH
EAHPEHQRAW RHFDALQSML QRVPGHLAAS TLQASRRSRR RVLRGIGALV GSGAVAGLSW
QLAGGQGGVR SWLADYRTGT GERRTVTLAD GSELTLNTRT SVDVSMDPVR RLLVLREGEI
LVQTAHSLSG PGAGAKDGRP FMVHTPQGRI LALGTRFTVR SQGGAGGDTV VSVLQDAVEI
QPLQDPSRSL RLQAGQQANF SRNGMLPAQA ADPAQVSWVG GSLIVDGWRL DDVVRELARY
RPGRLACDPA VAGLRVSGVF PLADTDKALA VITRAFPVRA AGLSRYWLTL VPV
|
|---|
| |