Gene Daci_5846 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDaci_5846 
Symbol 
ID5751467 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDelftia acidovorans SPH-1 
KingdomBacteria 
Replicon accessionNC_010002 
Strand- 
Start bp6500159 
End bp6501361 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content75% 
IMG OID641300978 
Productprecorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit 
Protein accessionYP_001566859 
Protein GI160901277 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG2242] Precorrin-6B methylase 2 
TIGRFAM ID[TIGR02467] precorrin-6y C5,15-methyltransferase (decarboxylating), CbiE subunit
[TIGR02469] precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones35 
Fosmid unclonability p-value0.985492 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTGATC CCTGGTTGAC ATTGGTGGGC CTGAACGAAG ACGGCCTGGA CGGCCTCTCG 
CCCGCCGCGC TGCGCGCGCT GGACGCGGCC GAGACCGTTT TTGGCGGGCC GCGCCACCTG 
TCGCTGGCCG GTGCCGGCGA GCGGGGCCGG CCCTGGCCCG TGCCCTTTGA CGTGGCACCC 
GTGCTGGCCT GCCGTGGCCG GCCCACGGTG GTGCTGGCGT CGGGCGATCC GTTCTGGTTC 
GGGGCGGGCG GCAGCCTGGC GGCGCATCTG GCGCCGCAGG AGTGGCGCTG CCACGCCCAA 
CCTTCGACAT TTTCGCTGCT GGCGTCCCGC CTGGGCTGGA AGCTGGAAGA CACGGTCTGC 
CTGGGCCTGC ACGCCGGCCA CGTGGAGCAG CTGCTGCCGC ACCTGTCGCC AGGCCGCCAG 
TCGCTGGTGC TGCTGCGCGA TGGCGCCGCC GTGGCCGCAT TGGCGGACTG GCTGGTGCAG 
GAAGGCTGGG GCGACAGCCG CCTGGAGGTC ATGGAATCCG TGGGCGGCCC GCGCGAGCGC 
CGCCGCGCAT GGCGCGCCGC CGAAGCCGCC CAGGCCCTGG CCGCCGACCC TGCCTGCGCG 
CCCGTGGCCG TGGCCGTGCT CGCCCAGGGC GGCGCGGCCC TGCCGCTGGT GCCGGGCCGG 
CCCAATCACT GGTACGCCAA CGACGGCCAG ATCACCAAGG CCCCGGCCCG CGCGCTGACC 
CTGGCGGCTC TTGCGCCGCG CCACGGCGAA TGCCTGTGGG ATGTGGGCGG CGGCTCGGGC 
TCGGTGGCCG TGGAGTGGTG CCTGGCCGGT GGCTCGGCCA TCAGCCTGGA GCAGCATGCG 
GCGCGTGCGG ACAACATCCG CCTCAACGCC CGGCGCTTCG GCCTGCAGGC GCGCCTGCGC 
GTGGTGCAGG GCGTGGCGCC CGAGGCGCTG GCCGAACTGC AGGCGCTGGC CCGGCCCCAG 
GCCGTGTTCG TGGGCGGGGG CTTTGACGCC GAATTGTTCG AGCGCCTGCA GGCCCTCATG 
CCCGCGGGCT GCCGCCTGGT CGTCAACGCC GTGACGCTGG AGACCGAGGC CCTGCTGGTG 
CAACTGCAGG CCGAGCACGG CGGCCAGCTG CTGCGGCTGG AGATTTCCAG CGCCGAGCCG 
CTGGGCCGCA TGCGCAGCTG GAAGGCTGCG CGGCCGCTGG TGCAGTGGAG CTGGCAGCGG 
TGA
 
Protein sequence
MTDPWLTLVG LNEDGLDGLS PAALRALDAA ETVFGGPRHL SLAGAGERGR PWPVPFDVAP 
VLACRGRPTV VLASGDPFWF GAGGSLAAHL APQEWRCHAQ PSTFSLLASR LGWKLEDTVC 
LGLHAGHVEQ LLPHLSPGRQ SLVLLRDGAA VAALADWLVQ EGWGDSRLEV MESVGGPRER 
RRAWRAAEAA QALAADPACA PVAVAVLAQG GAALPLVPGR PNHWYANDGQ ITKAPARALT 
LAALAPRHGE CLWDVGGGSG SVAVEWCLAG GSAISLEQHA ARADNIRLNA RRFGLQARLR 
VVQGVAPEAL AELQALARPQ AVFVGGGFDA ELFERLQALM PAGCRLVVNA VTLETEALLV 
QLQAEHGGQL LRLEISSAEP LGRMRSWKAA RPLVQWSWQR